DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_NAUPA (Elongation factor Tu OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 79/234 (33.76%), Postives = 121/234 (51.71%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NKMD + + + EV L + ++ D P V S + ++ +W K L+ A+D+ I P+R T+K +P++DV+ I G GTV GR+E G L IV F P+ +TT+V +EM + + EA GDNVG + +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLSRQVGVPAIVVFLNKMDMVD---DEELLELVEMEVRELLSEYEFDGDNAPVVAGSALKALEEVKAGQLGEWSEKILELMAAVDEYIPTPERDTEKDFLMPIEDVFSISGRGTVVTGRIERGTLHLNDDVDIVGFKPT-VTTKVTGIEMFRKEMDEAQAGDNVGVLLRGIKKDEVERGQVLAKPGSITP 306
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPA (Elongation factor Tu OS=Mycobacterium paratuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 85/236 (36.02%), Postives = 116/236 (49.15%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ D P V +S EGD S L+EA+D+ I +P R TDKP +P++DV+ I G GTV GRVE GV+ IV PS T V VEM + L + GDNVG + +D++RG V + P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELLELVEMEVRELLAAQEFDEDA-PVVRVSALKALEGDAKWVESVE-------QLMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVVTKPGTTTP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA1 (Elongation factor Tu OS=Mycobacterium avium (strain 104) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 85/236 (36.02%), Postives = 116/236 (49.15%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ D P V +S EGD S L+EA+D+ I +P R TDKP +P++DV+ I G GTV GRVE GV+ IV PS T V VEM + L + GDNVG + +D++RG V + P Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELLELVEMEVRELLAAQEFDEDA-PVVRVSALKALEGDAKWVESVE-------QLMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVVTKPGTTTP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 81/234 (34.62%), Postives = 117/234 (50.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + EV L + + D+IP V S + +W K L++A+D I P+R TDKP +P++DV+ I G GTV GRVE G +K G I+ T V VEM + L EA+ GDN+G + K+++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDQVD---DPELLELVEMEVRELLTEYEFPGDEIPIVTGSALKAMECGCGKRECEWCGKVWELMDAVDSYIPTPERDTDKPFLMPIEDVFTITGRGTVTTGRVERGKVKVGDEVEIIGLRDEIRKTVVTGVEMFRKILDEAVAGDNIGTLLRGVDRKEVERGMVLAKPGSIKP 307
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_LACS1 (Elongation factor Tu OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 81/242 (33.47%), Postives = 118/242 (48.76%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDNMIERSTNLDWYKGPTLLEALDQINE----PKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + D IP + + EGD E ++E +D ++E P+RPTDKP +P++DV+ I G GTV GR++ G +K G IV + T V VEM ++L E GDN+G + ++RG V + PG I Sbjct: 84 GHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKCDLVD---DDELLDLVEMEVRDLLSEYDFPGDDIPVIRGSALKALEGDKDAEAQ----------IMELMDTVDEYIPTPQRPTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLKDDVVKTTVTGVEMFRKTLDEGEAGDNIGALLRGVDRTQVERGQV-----LAKPGSI 300
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ENTFA (Elongation factor Tu OS=Enterococcus faecalis GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 80/236 (33.90%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NKMD + + + EV L + + D +P + + EGD E K L+ A+D+ I P+R TDKP +P++DV+ I G GTV GRVE G ++ G IV T V VEM + L A GDN+G + + +D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRNVGVPYIVVFLNKMDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDESYEE-------KILELMAAVDEYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGEVRVGDEVEIVGIKDETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIERGQVLAKPATITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_EIMTE (Elongation factor Tu, apicoplast OS=Eimeria tenella GN=tufA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 82/225 (36.44%), Postives = 113/225 (50.22%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST-NLDWYKG-PTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL--TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK+D + + EV L YN D + S + IE++ N W K L+EALD+ I EPKR +KP L ++D++ I G GTV G++E G +K V L TT V +EM + L A GDNVG + +++RG V Sbjct: 84 GHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTREHLLLAKQVGVPNIIVFLNKIDMVE---DNELLELVELEVRELLDIYEYNGDSTSIIKGSALKALEYIEKNDLNNKWVKNLKNLIEALDKSIPEPKRDINKPFLLSIEDIFSITGRGTVVTGKIERGKVKLNDTVDILGFNLLKTTTVTGIEMFQKILNTAEAGDNVGILLRGIQKNEVRRGMV 298
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BACHK (Elongation factor Tu OS=Bacillus thuringiensis subsp. konkukian GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNS 674 GH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ D IP + +G + DW K L+ +D I P+R TDKP +P++DV+ I G GTV GRVE G++K G I+ +T V VEM + L +A GDN+G + + +D++RG V + S Sbjct: 84 GHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVI-----KGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVGDVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKS 297
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BACCZ (Elongation factor Tu OS=Bacillus cereus (strain ZK / E33L) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNS 674 GH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ D IP + +G + DW K L+ +D I P+R TDKP +P++DV+ I G GTV GRVE G++K G I+ +T V VEM + L +A GDN+G + + +D++RG V + S Sbjct: 84 GHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVI-----KGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVGDVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKS 297
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BACCR (Elongation factor Tu OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNS 674 GH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ D IP + +G + DW K L+ +D I P+R TDKP +P++DV+ I G GTV GRVE G++K G I+ +T V VEM + L +A GDN+G + + +D++RG V + S Sbjct: 84 GHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVI-----KGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVGDVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKS 297 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |