DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BACAA (Elongation factor Tu OS=Bacillus anthracis (strain A0248) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNS 674 GH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ D IP + +G + DW K L+ +D I P+R TDKP +P++DV+ I G GTV GRVE G++K G I+ +T V VEM + L +A GDN+G + + +D++RG V + S Sbjct: 84 GHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVI-----KGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVGDVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKS 297
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_STRMU (Elongation factor Tu OS=Streptococcus mutans GN=tuf PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 82/243 (33.74%), Postives = 118/243 (48.56%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEAL----DQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIH 701 GH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + D IP + + EGD E ++E + D I +P+R TDKPL LP++DV+ I G GTV GR++ G +K IV V VEM + L E + GDNVG + +++RG V + PG IH Sbjct: 87 GHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKYLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDTAQE----------DIIMELMHTVDDYIPDPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVKVNDEVEIVGIRDDIQKAVVTGVEMFRKQLDEGIAGDNVGVLLRGIQRDEIERGQV-----LAKPGSIH 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RICAH (Elongation factor Tu OS=Rickettsia akari (strain Hartford) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 82/235 (34.89%), Postives = 118/235 (50.21%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFE---GDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLT--TEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D A + + EV L + G+ ++P + S + G E++ N L++A+D I P R TDKP +P++DV+ I G GTV GRVE+G++K G V T T VEM + L E GDNVG + ++++RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVSAADGPML-------QTREHILLAKQVGVPAMVVFLNKVDVVD---DPALLELVEMEVRDLLLQYGFPAYEVPIIKGSALQALAGKPEGEKAIN-------ELMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSIKP 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 82/240 (34.17%), Postives = 124/240 (51.67%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEG-----DNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ G QT+EH LLA +GV ++ NK D + E+V+ EV L++ + D++P +P S DN + W K L++ +D I PKR +KP + ++DV+ I G GTV GRVE GV+K G IV G + +TT V +EM ++L E++ GDNVG + +++RG V + + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNIVVFINKED----QVDDIELIELVELEVRETLQRYDFPGDEVPMIPGSALMALTALTDNPKIKPGENKWVDKIYNLMDIVDSYIPTPKRNIEKPFLMAIEDVFSITGRGTVATGRVERGVVKIGDSVEIVGLGATKITT-VTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKSITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_PORPU (Elongation factor Tu, chloroplastic OS=Porphyra purpurea GN=tufA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 80/240 (33.33%), Postives = 121/240 (50.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLD-----WY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL----TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E L + + D IPFV S + ++T++ W K +L+EA+D I P+R DK + ++DV+ I G GTV GR+E G++K G + GL TT + +EM ++L E L GDN+G + KD++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPTLVVFLNKEDQVD---DEELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNTSIKKGEDKWVDKIFSLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETRTTTITGLEMFQKTLEEGLAGDNIGILLRGVQKKDIERGMVLAKPGTITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_PARD8 (Elongation factor Tu OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 76/224 (33.93%), Postives = 113/224 (50.45%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D++KNM+TG +Q D A++++ +T G QTREH LLA + V +++ NK D + + ++E+ S+ + G N I + GD E K L+EA D I P R DKP +P++DV+ I G GTV GR+ETG++K G I+ G +G + V VEM + L + GDNVG + ++KRG V Sbjct: 84 GHADYVKNMVTGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMEMRELLSFYQFDGDNTPIIRGSALGALNGDAQWED-------KVMELMEACDTWIPLPPREIDKPFLMPVEDVFSITGRGTVATGRIETGIVKVGEEVQIIGLGAAGKKSVVTGVEMFRKLLDQGEAGDNVGLLLRGIDKNEIKRGMV 293
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_GRAFK (Elongation factor Tu OS=Gramella forsetii (strain KT0803) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 74/233 (31.76%), Postives = 114/233 (48.93%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNM+TG +Q D A+L++ +T G QTREH LL +G+ +++ NK+D + + V+++ S+ + G N I + EGD ++ L+EA+D I P+R DK +P++DV+ I G GTV GR+ETGV G I+ G LT+ + VEM + L GDNVG + + RG V + + P Sbjct: 84 GHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGIPRIVVFLNKVDLVDDEELLELVEMEVRDLLSFYEYDGDNGPVISGSALGALEGDEKWSKTVL-------ELMEAVDTWIELPERDVDKAFLMPIEDVFSITGRGTVATGRIETGVANTGDPIEIIGMGAGKLTSTITGVEMFRKILDRGEAGDNVGILLRGIEKSQISRGMVITKPGSVTP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_GEOTN (Elongation factor Tu OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK---PGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + + D++P + + EGD E K L+ A+D+ I P+R DKP +P++DV+ I G GTV GRVE G LK P I+ +T V VEM + L +A GDN+G + S +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDAQWEE-------KIVELMNAVDEYIPTPQREVDKPFMMPVEDVFSITGRGTVATGRVERGTLKVGDPVEIIGLSDEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVLAKPGSITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 80/236 (33.90%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + + D++P + + EGD E K L+ A+D+ I P+R DKP +P++DV+ I G GTV GRVE G LK G IV +T V VEM + L +A GDN+G + S +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDPQWEE-------KIIELMNAVDEYIPTPQREIDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDAVEIVGLADEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVLAKPGSITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 82/234 (35.04%), Postives = 117/234 (50.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKS----VEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ D IP + S + + + D LL+A D I EP+R DKP +P++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L + GDN+G + +D++RG V + + I P Sbjct: 84 GHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPYLVVFLNKCDMVD---DEELLELVELEVRELLSLYGFPGDDIPVIRGSALKALET-DDPNSADAAPVVALLDACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDQGQAGDNIGALLRGIKREDVERGQVLAAPKSIKP 304 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |