DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 81/235 (34.47%), Postives = 114/235 (48.51%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLT--TEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + D IP + + EGD + L L+EA+D I EP R DKP +P++DV+ I G GTV GRVE G++K G V T T V VEM + L E GDN+G + +D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 78/238 (32.77%), Postives = 118/238 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPT-LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFG--PSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L + + D IP + S N + + N+ +W L++A+D I EP+R DKP + ++DV+ I G GTV GR+E G +K G + +T V VEM ++L E + GDNVG + +D++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSLVVFLNKKDQVD---DEELLELVELEVRELLSEYDFPGDDIPIISGSALMAVNALIDNPNIKPGENEWTDQVLELMKAVDDNIPEPEREIDKPFLMAVEDVFSISGRGTVATGRIERGKVKVGETIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGIKKEDIERGMVIAKPGSITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTE (Elongation factor Tu OS=Chlorobium tepidum GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 80/236 (33.90%), Postives = 116/236 (49.15%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + G+ D IP + + EGD E+ L++A+D I +P R DKP +P++DV+ I G GTV GR+E G +K G IV P+ + V +EM ++L E GDN G + L+RG V + I P Sbjct: 84 GHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPELLEL----VEMELRELLTEYGFPGDDIPIIKGSALKALEGDPEAEKQIM-------ELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGDEVEIVGIKPTAKSV-VTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITP 300
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BUCMH (Elongation factor Tu (Fragment) OS=Buchnera aphidicola subsp. Melaphis rhois GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 84/240 (35.00%), Postives = 115/240 (47.92%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD-----NMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A+L++ +T G QTREH LL +GV ++ NK D + + + EV L + + DK P + + EGD +I+ + LD Y I EPKR D+P LP++DV+ I G GTV GRVE G++K G IV P+ T VEM + L E G+NVG + D++RG V S I P Sbjct: 65 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLTQYDFPGDKTPIIRGSALKALEGDCIWESKIIDLANILDTY-----------IPEPKRSIDQPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKPTSKTI-CTGVEMFRKLLDEGRAGENVGVLLRGTKRDDIERGQVLSKPGTITP 282
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ANOFW (Elongation factor Tu OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + + D++P + + EGD E K L+ A+D+ I P+R DKP +P++DV+ I G GTV GRVE G+LK G I+ T V VEM + L +A GDN+G + S +++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDPAWEA-------KIIELMNAVDEYIPTPQREVDKPFMMPVEDVFSITGRGTVATGRVERGILKVGDQVEIIGLSEEPKATTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVQRGQVLAKPGTITP 302
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU2_BARBK (Elongation factor Tu 2 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=tuf2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 82/234 (35.04%), Postives = 120/234 (51.28%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + A E+V+ EV L K + D IP V S ++S D + L+ +D+ I P+RP D+ +P++DV+ I G GTV GRVE GV+K G IV P+ TT V VEM + L + GDN+G + + ++RG V + + P Sbjct: 79 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEVRELLSKYDFPGDDIPIVKGSALAALEDSDKSIGEDAVR--LLMSEVDRYIPTPERPVDQSFLMPIEDVFSISGRGTVVTGRVERGVVKVGEEIEIVGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPGSVTP 298
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU1_BARBK (Elongation factor Tu 1 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 82/234 (35.04%), Postives = 120/234 (51.28%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + A E+V+ EV L K + D IP V S ++S D + L+ +D+ I P+RP D+ +P++DV+ I G GTV GRVE GV+K G IV P+ TT V VEM + L + GDN+G + + ++RG V + + P Sbjct: 79 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEVRELLSKYDFPGDDIPIVKGSALAALEDSDKSIGEDAVR--LLMSEVDRYIPTPERPVDQSFLMPIEDVFSISGRGTVVTGRVERGVVKVGEEIEIVGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALLRGIDREGIERGQVLAKPGSVTP 298
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_YEAST (Elongation factor Tu, mitochondrial OS=Saccharomyces cerevisiae GN=TUF1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 78/227 (34.36%), Postives = 114/227 (50.22%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D + + E+ L + G++ D P + + EG R + LL+A+D+ I P+R +KP +P++D++ I G GTV GRVE G LK G IV + L T V +EM + L A+ GDN G + LKRG V Sbjct: 120 GHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHIVVFVNKVDTID---DPEMLELVEMEMRELLNEYGFDGDNAPIIMGSALCALEG-----RQPEIGEQAIMKLLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGTVVTGRVERGNLKKGEELEIVGHNSTPLKTTVTGIEMFRKELDSAMAGDNAGVLLRGIRRDQLKRGMV 331
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + D +P + + EGD+ E L+ +D+ I EP+R T+KPL LP++DV+ I G GTV GR++ G ++ IV V VEM + L E L GDNVG + +++RG V + I P Sbjct: 87 GHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIIM-------ELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVIAKPGSINP 305
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RAT (Elongation factor Tu, mitochondrial OS=Rattus norvegicus GN=Tufm PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 82/236 (34.75%), Postives = 119/236 (50.42%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D++KNMITGT+ D +L++ + G QTREH LLA +GV+ ++ NK DA + E+V+ E+ L + GY ++ P + S + +R L LL+A+D I P R +KP LP++ VY I G GTV G +E G+LK G + + T V +EM H+SL A GDN+G + +DL+RG V M+ PG I Sbjct: 129 GHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAKQIGVEHVVVYVNKADAV----QDSEMVELVELEIRELLTEFGYKGEETPVIVGSALCA--LEQRDPELGVKSVQKLLDAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECELLGHNKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLV-----MVKPGSI 346 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |