DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_BRAJA (Elongation factor Tu OS=Bradyrhizobium japonicum GN=tuf PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24 Identity = 78/241 (32.37%), Postives = 114/241 (47.30%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG----------DNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLT--TEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + DKIP + S D ++E N+D Y I +P+RP D+P +P++DV+ I G GTV GRVE G++K G + T T V VEM + L + GDN+G + +D++RG V + + P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHDAILELMRNVDEY-----------IPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGLRATQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLAKPGSVKP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_TREDE (Elongation factor Tu OS=Treponema denticola GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 83/238 (34.87%), Postives = 127/238 (53.36%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT-PKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGIH 701 GH D++KNMITG +Q D A+L++ + S QT+EH LLA +GV +I NK+D P+ + +E+ + ++SY G+ P+ P + S F+ + E +T D LL+ +D+ +P R +DKP LP++D++ I G GTV GR+E GV+K IV P+ T V +EM ++ L E GDNVG + K+++RG V + PG IH Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAPD-------SVMPQTKEHLLLARQVGVPSIIVFLNKVDLVDDPELVELVEEEVRETLTSY----GF-PEDTPIIKGSAFKA--LQEGATAEDTACIEELLKTMDEYFKDPVRDSDKPFLLPIEDIFTIQGRGTVVTGRIERGVIKMNEEVEIVGIKPTKKTV-VTGIEMFNKLLDEGEAGDNVGLLLRGIEKKEVERGQV-----LAKPGSIH 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SALTO (Elongation factor Tu OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 84/238 (35.29%), Postives = 117/238 (49.16%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWY-KGPTLLEALD-QINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPG 692 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L Y D +P V +S EGD +W K L+ A+D I +P+R +KP +P++DV+ I G GTV GR E GVLKP +V T +EM + L EA G+NVG + +D++RG V +I PG Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYIVVALNKSDMVD---DEELLELVELEVRELLSSQEYPGDDLPVVRVSALKALEGDP--------EWAGKLMELMTAVDTSIPQPEREIEKPFLMPIEDVFTITGRGTVVTGRAERGVLKPNEEVELVGIREKSTKTTCTGIEMFRKLLDEARAGENVGLLLRGVKREDVERGMV-----VIKPG 300
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_RUBXD (Elongation factor Tu OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tuf1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 84/236 (35.59%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L + + D++P V + EGD L LLEALD+ I EPKR DKP L ++DV+ I G GTV GRVE G L+ IV P+ T V +EM ++S+ EA GDN+G + +++RG V + I P Sbjct: 88 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVD---DPELLELVEMEVRELLSEYEFPGDEVPVVVGSALKALEGDE-----GELGEQSILKLLEALDEYIPEPKRDIDKPFLLAVEDVFSIQGRGTVATGRVEQGKLRLNEEVEIVGIRPTRKTV-VTGIEMFNKSMQEAQAGDNIGVLLRGIKRDEIERGQVLAAPGSITP 307
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_NITHX (Elongation factor Tu OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 81/234 (34.62%), Postives = 118/234 (50.43%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST-NLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + D IP + S ++E S L L++A+D I +P+RP D+P +P++DV+ I G GTV GRVE G++K G IV P+ TT V VEM + L + GDN+G + +D++RG V + P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCDMVD---DPELLELVEMEVRELLSKYDFPGDDIPIIKGSALA---VLENSDPKLGHDAVLELMKAVDAYIPQPERPVDQPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKP 303
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 81/227 (35.68%), Postives = 115/227 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ ++ P V +S EGD +S L+EA+D+ I +P R TDKP +P++DV+ I G GTV GRVE G++ IV P T V VEM + L + GDNVG + +D++RG V Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELIELVEMEVRELLAAQDFD-EEAPVVKVSALKALEGDEKWVKSVE-------ELMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPDTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 82/227 (36.12%), Postives = 115/227 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ D P V +S EGD +S L++A+D+ I +P R TD+P +P++DV+ I G GTV GRVE GV+ IV P T V VEM + L + GDNVG + +D++RG V Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFDEDA-PVVRVSALKALEGDEKWVKSVE-------ELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 82/227 (36.12%), Postives = 115/227 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ D P V +S EGD +S L++A+D+ I +P R TD+P +P++DV+ I G GTV GRVE GV+ IV P T V VEM + L + GDNVG + +D++RG V Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFDEDA-PVVRVSALKALEGDEKWVKSVE-------ELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 82/227 (36.12%), Postives = 115/227 (50.66%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ D P V +S EGD +S L++A+D+ I +P R TD+P +P++DV+ I G GTV GRVE GV+ IV P T V VEM + L + GDNVG + +D++RG V Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFDEDA-PVVRVSALKALEGDEKWVKSVE-------ELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MICLU (Elongation factor Tu OS=Micrococcus luteus GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 82/240 (34.17%), Postives = 117/240 (48.75%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL----TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPPGGI 698 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ D+ P + S EGD +S L++A+D+ I +P R DKP +P++DV+ I G GTV GR E G LK V G+ T V +EM H+ L EA G+N G + D++RG V ++ PG I Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPALLVALNKSDMVE---DEELLERVEMEVRQLLSSRSFDVDEAPVIRTSALKALEGDPQWVKSVE-------DLMDAVDEYIPDPVRDKDKPFLMPIEDVFTITGRGTVVTGRAERGTLKINSEVEI--VGIRDVQKTTVTGIEMFHKQLDEAWAGENCGLLVRGLKRDDVERGQV-----LVEPGSI 301 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |