DC900092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA9 (Elongation factor Tu OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tuf PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 81/228 (35.53%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPT-LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ D P V +S EGD +W K L++A+D+ I +P R T+KP +P++DV+ I G GTV GRVE GV+ IV + T V VEM + L + GDNVG + +D++RG V Sbjct: 86 GHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDMVD---DEELLELVEMEVRELLSSQDFDGDNAPVVRVSALKALEGD--------AEWGKTVADLMDAVDESIPDPVRETEKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEDVEIVGIKDTTTKTTVTGVEMFRKLLDQGQAGDNVGLLVRGVKREDVERGQV 295
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 81/240 (33.75%), Postives = 123/240 (51.25%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ G QT+EH LLA +GV ++ NK D + A E+V+ EV L + D++P V S + ++ + W K +L++ +D I P+R TDKP + ++DV+ I G GTV GRVE G +K G IV + +T+ V +EM ++L E++ GDNVG + KD++RG V + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNVVVFLNKED----QVDDAELLELVELEVRETLSDYDFPGDEVPVVAGSALLALESLTQNPKIVKGENKWVDKIYSLMDQVDAYIPTPERDTDKPFLMAVEDVFSITGRGTVATGRVERGTVKVGEAIEIVGLREAPVTSIVTGLEMFQKTLEESVAGDNVGILLRGIQKKDIERGMVLAKPGTIKP 312
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_AZOC5 (Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=tuf1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 80/233 (34.33%), Postives = 116/233 (49.79%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + D IP V S + +S L L+ +D+ I +P+RP D+P +P++DV+ I G GTV GRVE G++K G IV P+ TT V +EM + L + GDNVG + +D++RG V + P Sbjct: 85 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYDFPGDDIPIVRGSALCA--LENKSPELGAEAILKLMAEVDKYIPQPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGIRPTVKTT-VTGIEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVVCKPGSVKP 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_ACHLI (Elongation factor Tu OS=Acholeplasma laidlawii (strain PG-8A) GN=tuf PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 78/233 (33.48%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MIVTFGPSGL-TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV +++ NK D + D + EV L + + D IP + +G + +W K L++A+D I+ P R TDKP +P++DV+ I G GTV GRV+ G++K G + G + TT V VEM + L +A GDN+G + + ++RG V S + P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPKLVVFLNKADLVD---DEELLDLVEMEVRELLSEYDFPGDDIPVI-----KGSALGALEGKPEWVAKVEELMDAVDAYIDTPLRATDKPFMMPVEDVFTITGRGTVATGRVDRGIVKVGDQVEIVGITDTKTTTVTGVEMFRKLLDQAEAGDNIGALLRGVDREGVERGQVLSKPGTVKP 301
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 80/230 (34.78%), Postives = 116/230 (50.43%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDN-MIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTF-----GPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYV 662 GH D++KNMITG +Q D +L++ G QT+EH LLA +GV ++C NK+D + ++E+ S+ K G D IP + +S +G N I R L L++A+D+ I +P R DKP +P++DV+ I G GTV GR+E GV+K G V G L + V VEM + L GDNVG + +D++RG V Sbjct: 139 GHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG---DDIPIIRGSALSALQGTNDEIGRQAILK------LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMV 352
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: CYSN_YERE8 (Sulfate adenylyltransferase subunit 1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysN PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 62/203 (30.54%), Postives = 108/203 (53.20%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNV 611 GH + +NM TG S D A+L+ID+ G + QTR H+ +A LG++ ++ NKMD Y ++ +++ ++ S+ +++ + D I FVP+S +GDN+ S ++WY GPTLLE L+ ++ +PLR P+Q V + G + G+++ G + PSG+ + V + L +A PG+ + Sbjct: 119 GHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFIATLLGIRHLVVAVNKMDLVD--YQESVFEQFKQDYLSFAQQLPTDLD-IKFVPLSALDGDNVASPSEKMNWYSGPTLLEVLESVDVVNASRQQPLRFPVQYVNRPNLDFRGYAGTLSAGIVRVGQKIKVLPSGVESTVARIVTFDGDLTQAGPGEAI 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: CYSN_VIBVU (Sulfate adenylyltransferase subunit 1 OS=Vibrio vulnificus GN=cysN PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 68/200 (34.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPG 602 GH + +NM TG S D AV++ID+ G + QTR H+ ++ LG+K + NKMD ++S+ R++EI E ++ K + D I +PIS EGDN++E S + WY+GPTLLE L+ ++ K R P+Q V + G + +GV+K G +T PSG ++ V + L +A G Sbjct: 115 GHEQYTRNMATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFVVAVNKMDLV--EFSQQRFEEIKAEYQAFSKNLRGETD-IQIIPISALEGDNVVELSQQMAWYQGPTLLEILESVDVVKEKEAGEFRFPVQYVNRPNLDFRGFAGTISSGVVKVGDRITALPSGKSSTVARIVTFDGDLEQAQAG 304
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic OS=Thalassiosira pseudonana GN=tufA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 82/245 (33.47%), Postives = 122/245 (49.80%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT--------LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D DE+++ EV L + D IP P S + + S+N D +G L++A+D I P+R +K + ++DV+ I G GTV GR+E GV+K G IV G + TT + +EM ++L E GDNVG + + ++++RG V S I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPHIVVFLNKQDQVDD-------DELLELVELEVRELLSTYDFPGDDIPICPGSALQAIEAL--SSNPDVKRGDNPWVDKIFALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDNVEIVGVGDT-QTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 76/240 (31.67%), Postives = 120/240 (50.00%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP------TLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGL----TTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + E+ L K + D+IP + S + ++ + + P L++A+D I P+R DKP + ++DV+ I G GTV GR+E G +K G V GL +T V +EM ++L E + GDNVG + +++RG V + + I P Sbjct: 84 GHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKVDMVD---DEELLELVELEIRELLSKYDFPGDEIPIIRGSALKALERMQANPKTQRGEDPWVDKIYELMDAVDSYIPTPERDVDKPFLMAVEDVFSITGRGTVATGRIERGRIKVGETVEL--VGLRETRSTTVTGLEMFQKTLDEGIAGDNVGVLLRGIQKNEVERGMVLAKPKTITP 311
BLAST of DC900092 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 82/236 (34.75%), Postives = 117/236 (49.58%), Query Frame = 3 Query: 3 GHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF---EGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNXKNXSVKDLKRGYVASNSRMIPP 689 GH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK+D D + EV LK + D +P V +S G+ E++ + L+EA+D I P+R DKP +P++D++ I G GTV GR+E G+ K G IV F + T V VEM + L E GDNVG + ++RG V + I P Sbjct: 85 GHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVDMVD---DSELLDLVELEVRELLKSYQFPGDDLPVVRVSALGALNGEPQWEKTVD-------ELMEAVDSYIPMPERAIDKPFIMPIEDIFSIQGRGTVVTGRIERGICKVGEEMEIVGFRDTRKTV-VTGVEMFKKLLDEGRAGDNVGLLLRGVEKDMVERGQVIAKPGSITP 302 The following BLAST results are available for this feature:
BLAST of DC900092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900092 ID=DC900092; Name=DC900092; organism=Citrus sinensis; type=EST; length=707bpback to top |