CN185921

Overview
NameCN185921
Unique NameCN185921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185921_ssr81 microsatellite CN185921_ssr81:81..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:22..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.513e-62
Identity = 111/155 (71.61%), Postives = 138/155 (89.03%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQ 649
            +VGKYELGRT+GEG+FAKVKFA+N ETG+ VA+KIVDR  +++ KMV+QIKREIS MKL++HP V+++ EV+AS+TKIYI+LE+I GGELFDKI ++GRL E EAR+YF QLI+ VDYCHS+GV+HRDLKPENLLLDS G LKISDFGLSA+ +Q
Sbjct:    5 KVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQ 159          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 9.812e-62
Identity = 110/151 (72.85%), Postives = 136/151 (90.07%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSA 637
            RVGKYE+GRT+GEG+FAKVKFA+N E+G+ VA+K+VDR  +L+HKM +QIKREIS MKL++HPNV+++ EV+AS+ KI+I+LEFI GGELFDKI +HGRL E +ARRYFQQLI+ VD+CHS+GV+HRDLKPENLLLDS G LKISDFGLSA
Sbjct:    9 RVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSA 159          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.855e-61
Identity = 115/169 (68.05%), Postives = 139/169 (82.25%), Query Frame = 2
Query:  170 PASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            P  R  VGKYE+GR +GE +F K++ A + ETGD VA+ I+D+D+VL+HKM EQIKREIS MKLI HPNV+++ EV+ASK KIYIVLEFI GG+LFDKI   GR+ EDEA+RYFQQLINAVDYCHSRGV+HRDLKPENLLLD+   LK+++FGL A+SQQ   DGL HT
Sbjct:    4 PKVRRWVGKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPNVVQLYEVLASKAKIYIVLEFISGGKLFDKIKNDGRMNEDEAQRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAQENLKVAEFGLIALSQQAGGDGLRHT 172          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.085e-60
Identity = 107/166 (64.46%), Postives = 145/166 (87.35%), Query Frame = 2
Query:  179 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            + RVG+YE+GRT+G+G+FAKVKFA + +TG  VA+K++D+D +L H+M+ QIKREIS MK+++HPN++++ EV+A KTKIYI+LE I GGELFDKIA+ G+L+E+EAR+YFQQLI+A++YCHS+GV+HRDLKPENLLLDS G LK+SDFGLS ++Q  +  GLLHT
Sbjct:   12 KKRVGRYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYCHSKGVYHRDLKPENLLLDSRGNLKVSDFGLSTLAQ--KGVGLLHT 175          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.417e-60
Identity = 108/163 (66.26%), Postives = 141/163 (86.50%), Query Frame = 2
Query:  188 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            +G+YE+G+ LG+G+FAKV +A+N+ TG  VAIK++++D+V++  ++EQIKREIS M+L+KHPNV+++ EVMASK+KIY VLE+  GGELF+KIAK G+L ED ARRYF QLINAVDYCHSRGV+HRDLKPENLLLD    LK+SDFGLSA+++  R+DGLLHT
Sbjct:    9 MGRYEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQLFEVMASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALAESKRQDGLLHT 171          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.858e-58
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 2
Query:  113 VELTAIYRTAEVEKMSVKVPASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            VEL    R     + S    A   R+GKYE+GR LGEG F KVK A++ +TG   AIKI+DR ++L  K+ EQIKREI+T+KL+KHPNV+++ EV ASKTKIY+VLE+++GGELFDKIA  G+L E E R+ FQQL++AV YCH +GV+HRDLKPEN+L+D+ G +K+SDFGLSA+ Q  R+DGLLHT
Sbjct:   59 VELRHRARARRRRRPSHPRRAPAMRMGKYEMGRALGEGHFGKVKLARHADTGAAFAIKILDRQRILAMKIDEQIKREIATLKLLKHPNVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAKGNIKVSDFGLSALPQNQRKDGLLHT 246          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.039e-58
Identity = 105/166 (63.25%), Postives = 138/166 (83.13%), Query Frame = 2
Query:  179 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            R    KYE+GR LG+G+F KV + K + TG+ VAIKI+++DQV R  M+EQIKREIS M+L++HPN++++ EVMA+KTKI+ ++E++ GGELF KI K G+LKED AR+YFQQLI+AVD+CHSRGV HRDLKPENLL+D  G LK+SDFGLSA+ +Q+ +DGLLHT
Sbjct:   37 RVLFAKYEMGRLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTKIFFIMEYVKGGELFSKIVK-GKLKEDSARKYFQQLISAVDFCHSRGVSHRDLKPENLLVDENGDLKVSDFGLSALPEQILQDGLLHT 201          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.039e-58
Identity = 102/155 (65.81%), Postives = 137/155 (88.39%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQ 649
            RVGKYE+GRT+GEG+FAKVKFA+N +TGD VAIKI+ +  +L+++MV+QIKREIS MK+++HPN++++ EV+AS +KIYIVLEF+ GGELFD+I   GRL+E E+R+YFQQL++AV +CH +GV+HRDLKPENLLLD+ G LK+SDFGLSA+ Q+
Sbjct:    7 RVGKYEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNRMVDQIKREISIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDAVAHCHCKGVYHRDLKPENLLLDTNGNLKVSDFGLSALPQE 161          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.581e-58
Identity = 110/167 (65.87%), Postives = 140/167 (83.83%), Query Frame = 2
Query:  179 RTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHK-MVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            R   GKYE+GR LG+G+FAKV + K +  G+ VAIK++++DQV++   M+EQIKREIS MKL++HPN++++ EVMA+KTKI+ V+EF+ GGELF KI+K G+L ED ARRYFQQLI+AVDYCHSRGV HRDLKPENLLLD  G LKISDFGLSA+ +Q+ +DGLLHT
Sbjct:    6 RVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMKRPGMMEQIKREISIMKLVRHPNIVELKEVMATKTKIFFVMEFVKGGELFCKISK-GKLHEDAARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGDLKISDFGLSALPEQILQDGLLHT 171          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.501e-57
Identity = 104/161 (64.60%), Postives = 138/161 (85.71%), Query Frame = 2
Query:  194 KYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            KYELGR LG+G+FAKV  A+N++TG+ VAIK++D+ +V +  +++QIKREIS M+L++HP+V+ + EVMASKTKIY  +E++ GGELFDK++K G+LKE+ AR+YFQQLI A+DYCHSRGV+HRDLKPENLLLD  G LKISDFGLSA+ +  ++DGLLHT
Sbjct:   11 KYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSK-GKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHT 170          
The following BLAST results are available for this feature:
BLAST of CN185921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK8_ARATH7.513e-6271.61CBL-interacting serine/threonine-protein kinase 8 ... [more]
CIPK8_ORYSJ9.812e-6272.85CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
PP395_ARATH2.855e-6168.05Pentatricopeptide repeat-containing protein At5g21... [more]
CIPKO_ORYSJ1.085e-6064.46CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
CIPKB_ORYSJ2.417e-6066.26CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKL_ORYSJ3.858e-5859.04CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPKP_ARATH5.039e-5863.25CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKO_ARATH5.039e-5865.81CBL-interacting serine/threonine-protein kinase 24... [more]
CIPK5_ARATH6.581e-5865.87CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKK_ARATH2.501e-5764.60CBL-interacting serine/threonine-protein kinase 20... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185921 ID=CN185921; Name=CN185921; organism=Citrus sinensis; type=EST; length=676bp
CTTTTACTTCAAATCTTCGTTCAAACCAACATTTTCAGGCCACAGAGGAA
TAAAGCCAATCTCCTTCGTGTATCCATAACTATATATATACGCGCGCGTG
CACAGCGGTGGTGTGGAATTGACCGCTATATATCGGACGGCGGAGGTTGA
GAAAATGAGCGTGAAAGTACCGGCATCGAGGACACGTGTAGGGAAGTACG
AGTTGGGAAGAACCCTTGGTGAGGGTAGCTTTGCCAAGGTCAAGTTTGCA
AAGAATGTTGAGACCGGAGATTTCGTGGCCATTAAAATTGTTGATCGTGA
TCAAGTCCTTCGTCACAAGATGGTCGAACAGATAAAACGTGAAATATCAA
CAATGAAGCTTATCAAACATCCGAATGTCATTAAAATTATTGAGGTCATG
GCTAGCAAAACAAAGATATACATTGTTCTCGAATTCATTGACGGCGGCGA
GCTCTTCGATAAAATTGCGAAGCATGGAAGATTGAAAGAGGATGAAGCCA
GAAGATATTTCCAGCAGCTCATTAATGCAGTGGACTATTGTCATAGCAGA
GGGGTGTTCCATAGAGATTTGAAGCCAGAGAATCTTCTCCTAGACTCGTA
TGGTGTTCTTAAAATTTCAGATTTTGGTTTGAGTGCAATTTCTCAACAAG
TACGGGAGGATGGGCTGCTTCACACT
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