CN185921

Overview
NameCN185921
Unique NameCN185921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185921_ssr81 microsatellite CN185921_ssr81:81..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1656 contig Csv1_Contig1656:22..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.427e-36
Identity = 76/148 (51.35%), Postives = 107/148 (72.30%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFG 628
            RVG Y++  TLG+G+FA VK  ++  T   VAIKI+D+ Q L    +E+I RE+  MK++ HP++IK+ +VM +K+ +Y+V E+   GE+FD +A HGRL E EARR F Q+++AVDYCH R + HRDLK ENLLLD+   +KI+DFG
Sbjct:   16 RVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFG 162          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.178e-36
Identity = 76/169 (44.97%), Postives = 116/169 (68.64%), Query Frame = 2
Query:  170 PASRTRVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            P     VG Y L +TLG+G    VK   +  TG  VA+KIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+++A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T
Sbjct:   25 PQHAQYVGPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLET 189          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.178e-36
Identity = 76/163 (46.63%), Postives = 115/163 (70.55%), Query Frame = 2
Query:  188 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            VG Y L +TLG+G    VK   +  TG  VAIKIV+R++ L   ++ +++REI+ +KLI+HP+V+K+ +V  +K  +Y+VLE + GGELFD + K GRL   EAR++F+Q+++A+D+CHS  + HRDLKPENLLLD    ++I+DFG++++      D LL T
Sbjct:   47 VGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREK-LSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQV---GDSLLET 205          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 5.422e-36
Identity = 73/150 (48.67%), Postives = 109/150 (72.67%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLS 634
            R+G YE+ RT+G+G+FA VK A ++ T   VAIKI+D+ Q L  + +++I RE+  MK++ HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E EARR F+Q++ AV +CH R + HRDLK ENLLLD+   +KI+DFG S
Sbjct:    4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKSQ-LDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS 152          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 73/150 (48.67%), Postives = 109/150 (72.67%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLS 634
            R+G YE+ RT+G+G+FA VK A ++ T   VAIKI+D+ Q L  + +++I RE+  MK++ HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E EARR F+Q++ AV +CH R + HRDLK ENLLLD+   +KI+DFG S
Sbjct:    4 RIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQ-LDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS 152          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 74/150 (49.33%), Postives = 109/150 (72.67%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLS 634
            RVG YE+ RT+G+G+FA VK A ++ T   VAIKIVD+ Q L  + +++I RE+  MK+++HP++I++ +VM ++  IY+V E+  GGE+FD +  HGR+ E +ARR F+Q++ AV +CH R + HRDLK ENLLLD    +KI+DFG S
Sbjct:   55 RVGYYEMERTIGKGNFAVVKLATHMITKAKVAIKIVDKTQ-LDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVYFCHCRSIVHRDLKAENLLLDHNLNIKIADFGFS 203          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK2_PONAB (Serine/threonine-protein kinase SIK2 OS=Pongo abelii GN=SIK2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 75/147 (51.02%), Postives = 106/147 (72.11%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDF 625
            RVG Y++  TLG+G+FA VK  ++  T   VAIKI+D+ Q L    +E+I RE+  MK++ HP++IK+ +VM +K+ +Y+V E+   GE+FD +A HGRL E EARR F Q+++AVDYCH R + HRDLK ENLLLD+   +KI+DF
Sbjct:   16 RVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADF 161          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 75/148 (50.68%), Postives = 107/148 (72.30%), Query Frame = 2
Query:  185 RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFG 628
            RVG Y++ RTLG+G+FA VK A++  T   VAIKI+D+ + L    +E+I RE+  MKL+ HPN+IK+ +VM +K  +YIV EF   GE+FD +  +G L E+EAR+ F Q+++AV+YCH+  + HRDLK ENLLLDS   +K++DFG
Sbjct:   23 RVGFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDSSNLEKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARQKFWQILSAVEYCHNHHIVHRDLKTENLLLDSNMDIKLADFG 169          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.248e-36
Identity = 76/164 (46.34%), Postives = 115/164 (70.12%), Query Frame = 2
Query:  188 VGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVL-RHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFGLSAISQQVREDGLLHT 676
            VG + +G+TLG+G+  KVK   + +TG  V IKI++++ ++ +  M  +I+REI  MKLI HPN +K+ EV  +   ++++LE+++GGELFD + + G L+  EA  +FQQ+I  ++YCHSR + HRDLKPENLLL     +KI+DFG+ +I   VR+D LLHT
Sbjct:    6 VGPFIIGKTLGQGTTGKVKLGFHKDTGFKVGIKIINKELLINKPSMRRKIEREIVLMKLIDHPNAMKMYEVYETSKYLFLILEYVEGGELFDYLVEKGGLESGEALFFFQQIIIGLEYCHSRNICHRDLKPENLLLSGDKRIKIADFGMGSI---VRKDMLLHT 166          
BLAST of CN185921 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.208e-35
Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 2
Query:  149 EKMSVKVPASRT----RVGKYELGRTLGEGSFAKVKFAKNVETGDFVAIKIVDRDQVLRHKMVEQIKREISTMKLIKHPNVIKIIEVMASKTKIYIVLEFIDGGELFDKIAKHGRLKEDEARRYFQQLINAVDYCHSRGVFHRDLKPENLLLDSYGVLKISDFG 628
            E  SV  P++      RVG Y++ RTLG+G+FA VK A++  T   VAIKI+D+ + L    +E+I RE+  MKL+ HP++IK+ +VM +K  +YIV EF   GE+FD +  +G L E EAR+ F Q+++AV+YCHS  + HRDLK ENLLLD+   +K++DFG
Sbjct:    6 EDASVPAPSAAQPRPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTR-LDPSNLEKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDHLTSNGHLSESEARKKFWQILSAVEYCHSHHIVHRDLKTENLLLDANMNIKLADFG 168          
The following BLAST results are available for this feature:
BLAST of CN185921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SIK2_HUMAN1.427e-3651.35Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
BRSK1_MOUSE3.178e-3644.97BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN3.178e-3646.63BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
SIK3_MOUSE5.422e-3648.67Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]
SIK3_HUMAN7.081e-3648.67Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
SIK3_DANRE7.081e-3649.33Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
SIK2_PONAB7.081e-3651.02Serine/threonine-protein kinase SIK2 OS=Pongo abel... [more]
SIK1_MOUSE7.081e-3650.68Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]
Y7165_DICDI9.248e-3646.34Probable serine/threonine-protein kinase DDB_G0277... [more]
SIK2_CHICK1.208e-3547.56Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185921 ID=CN185921; Name=CN185921; organism=Citrus sinensis; type=EST; length=676bp
CTTTTACTTCAAATCTTCGTTCAAACCAACATTTTCAGGCCACAGAGGAA
TAAAGCCAATCTCCTTCGTGTATCCATAACTATATATATACGCGCGCGTG
CACAGCGGTGGTGTGGAATTGACCGCTATATATCGGACGGCGGAGGTTGA
GAAAATGAGCGTGAAAGTACCGGCATCGAGGACACGTGTAGGGAAGTACG
AGTTGGGAAGAACCCTTGGTGAGGGTAGCTTTGCCAAGGTCAAGTTTGCA
AAGAATGTTGAGACCGGAGATTTCGTGGCCATTAAAATTGTTGATCGTGA
TCAAGTCCTTCGTCACAAGATGGTCGAACAGATAAAACGTGAAATATCAA
CAATGAAGCTTATCAAACATCCGAATGTCATTAAAATTATTGAGGTCATG
GCTAGCAAAACAAAGATATACATTGTTCTCGAATTCATTGACGGCGGCGA
GCTCTTCGATAAAATTGCGAAGCATGGAAGATTGAAAGAGGATGAAGCCA
GAAGATATTTCCAGCAGCTCATTAATGCAGTGGACTATTGTCATAGCAGA
GGGGTGTTCCATAGAGATTTGAAGCCAGAGAATCTTCTCCTAGACTCGTA
TGGTGTTCTTAAAATTTCAGATTTTGGTTTGAGTGCAATTTCTCAACAAG
TACGGGAGGATGGGCTGCTTCACACT
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