DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17 Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 48 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA 713 G+K +L GPPG GKTL A A+ + +V +I Y+GE+A IR+ F +AR QPC++F DE DA+ R G E++R + LL +D G +I ATN LD A+ R R D + P LK+ + D EG++ A++ VCT+A + I R V DF +A++ +EA++ A Sbjct: 114 GLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFAR-KQPCVLFFDEFDALARTRDDSG--EHNELRRVVNSLLLFIDNMQPKG--FLIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPV--AFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRALQ--DEARRRAGQA 324
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YJOB_BACSU (Uncharacterized ATPase yjoB OS=Bacillus subtilis GN=yjoB PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 63 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL-RPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADL 590 +G+LLYGPPG GKT L ++IA +IDA V+ I ++ S+ I E+F AR P ++ +++ID++ E R+ LN LDG + +I TN P+ +DP L+ R GR DR EI LP+E+ R+E +K+ GI GEI A KL EGF+ A L Sbjct: 221 RGILLYGPPGNGKTTLVKSIAGSIDA----PVAYWQITEF--TSSETIEEVFQAARRLAPAVLVIEDIDSM------------PEDVRSF--FLNTLDGATSKEGLFLIGTTNYPEEIDPGLMNRAGRFDRAYEIGLPDEELRLEYMKMRGFGIFLSEGEIKNAA--KLTEGFSFAQL 376
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YCF46_PORPU (Uncharacterized AAA domain-containing protein ycf46 OS=Porphyra purpurea GN=ycf46 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 62/202 (30.69%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 48 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS-ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDY--EAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 644 GI PKG+LL G GTGK+L A+AIA++ L++ + +GES +REM A PC++++DEID +S+G S + T + L+ ++ V ++ N L +LR GR D + LPN + R I +IH A I +Y + + L F+GA++ E+ +A ER++ Sbjct: 255 GIPTPKGLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDSGTSARVFGTFITWLS-----EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSWQNYNIKQLSLLCNKFSGAEIEQAIVESMHTAFSEEREF 451
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YCF46_GRATL (Uncharacterized AAA domain-containing protein ycf46 OS=Gracilaria tenuistipitata var. liui GN=ycf46 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16 Identity = 64/211 (30.33%), Postives = 103/211 (48.82%), Query Frame = 3 Query: 48 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI--AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAV 674 G+ PKG+LL G GTGK+L+A+AI+ + LK+ I +G+S +R M A PCI+++DEID R + S R L +L L ++ V +I N+ L LLR GR D + LP+ + R +I +IH + D + + KL + F+GA++ EA +A +R++ +D + A+ Sbjct: 256 GLTVPKGILLIGIQGTGKSLIAKAISGQWNLPLLKLDMGKIFASLVGQSEERMRHMIKTAEQSSPCILWIDEIDKCFTRLNNYTDSGTN--GRVLSTMLTWLS--EKKKPVFVIATANQVLSLPSELLRKGRFDEIFFLNLPSLEEREKIFQIHLMKFRPLSWRKYDIKYLSKLTDQFSGAEIEQAIIEAMYNAFYEKREFST-QDIINAI 461
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-14 Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 291 SEGTSADREIQRT----LMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 626 S +S + E+++ L+ LL ++DG + L V + ATNRP+VLDPAL+RPGR D+ + I LP +Q R+EILK++A + I +E G + ADL + ++ + A+ Sbjct: 1487 SHESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAV 1602 HSP 2 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 60 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGES---ARLIREMFGYARDHQPCIIFMDEIDAIGGRR 287 PKG+LL GPPGTGKTLL +AIA +AN +V S + GES A + ++F AR+ PCI+F+DEID +G +R Sbjct: 1334 PKGILLVGPPGTGKTLLVQAIAG--EANVPVLVQSLSLISQPGESDSGAEKLTDLFKRARELSPCIVFIDEIDTLGIKR 1410
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 291 SEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI 650 +E S E Q +L+ +LL +LDG V + ATNRP+VLDPALLRPGR D+ +++ LP ++ R+EIL+ + + + + + GF ADL + E+ + AI + ++ I Sbjct: 1141 AEYNSKQNEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNHTI 1261
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATD3B_HUMAN (ATPase family AAA domain-containing protein 3B OS=Homo sapiens GN=ATAD3B PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 57/217 (26.27%), Postives = 102/217 (47.00%), Query Frame = 3 Query: 69 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR-DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIA-----------KHGEIDY----EAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671 +LLYGPPGTGKTL A+ +A + ++ +++ + E + ++F +A + ++FMDE DA +R +E S D ++ TL L + K +++A+N P+ D A+ R+D + LP ++ R ++++H K + DY V +L EG +G ++ + +A A +D V+ E M A Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDY-AIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKD--LRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCAI--NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY-ASKDGVLTEAMMDA 556
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae GN=BCS1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 48 GIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQP--CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKI 458 GI +G LLYGPPG+GKT +A+A +D N + S L + + ++ P I+ +++IDA +R G T LLN LDG + M TN P+ LD A++RPGR+D K+ Sbjct: 256 GIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLS---------ENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQGFHS-SVTFSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKV 384
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YCX1_OSTTA (Uncharacterized protein OtCpg00170 OS=Ostreococcus tauri GN=OtCpg00170 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11 Identity = 61/219 (27.85%), Postives = 100/219 (45.66%), Query Frame = 3 Query: 60 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF-------DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI--PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNE 689 PKG+LL G PG G++ LARAIAS K S+ +D G + +F RD P I+F+ +ID I R E T++ IQ T + L DG+ K+ + + + +DPA LR GR + + + P+ E+ + + K + + I + ++EGF A++ ++ + + AIR +F+ LNE Sbjct: 765 PKGMLLVGDPGNGRSFLARAIASESRLPVFKTESTRFLDVKFG--VMRLMSLFRRVRDQAPGILFIRDIDLITIDR--ERTNSPELIQLT-TQFLICFDGYYIGSEARPTQRKIFTLGSVSDITRMDPACLRSGRFEWVVNLRKPILGERKFLLLQKASQSPVQIDATIAWNYFGLMSEGFTNAEVVSIVNNSTLQAIR-------KNEFVHTNESLNE 971 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |