DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.519e-69 Identity = 128/226 (56.64%), Postives = 168/226 (74.34%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++ VCTEAGM A+R R +V EDF AV K+ Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.519e-69 Identity = 128/226 (56.64%), Postives = 168/226 (74.34%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++ VCTEAGM A+R R +V EDF AV K+ Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.519e-69 Identity = 130/227 (57.27%), Postives = 169/227 (74.45%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH+ + ID + + + G +GA+L+ VCTEAGM A+R R +V EDF AV K+ Sbjct: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKV 403
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.519e-69 Identity = 130/227 (57.27%), Postives = 169/227 (74.45%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH+ + ID + + + G +GA+L+ VCTEAGM A+R R +V EDF AV K+ Sbjct: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKV 403
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 6.002e-69 Identity = 133/244 (54.51%), Postives = 171/244 (70.08%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGK 737 IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + F++V S ++ KYIGE +RL+RE+F AR+H P IIFMDEID+IG R +D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPALLR GR+DRKIE P PNE +R+EILKIH+ + ID E + G +GA+++ VCTEAGM A+R R +V EDF AV K+ L+ + N+D K Sbjct: 212 IELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-----LKKTGDLNSDLRK 450
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.024e-68 Identity = 122/230 (53.04%), Postives = 175/230 (76.09%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA 692 ++ELPL +PE F R+GI+PPKGVLLYG PGTGKTLLA+A+A +A F++VV S ++ KYIG+ ++L+RE+F AR P IIF+DE+D+I RR +E T ADRE+QRTLM+LL ++DGFD+ +++I ATNRPDVLDPA+LRPGR DR + +P+P ++R +ILKIH + +ID++ + K EG +GADL+ + TEAGM A+R +++ V E+F++AV K++ A Sbjct: 174 AVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMA 403
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.337e-68 Identity = 133/237 (56.12%), Postives = 173/237 (73.00%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF-SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESS 710 IELP+ +PELF +GI PKG+LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R S G S D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDPALLRPGR+DRKIE P P+ ++R EIL+IH+ + ID +++ + G +GA+L+ VCTEAGM A+R R +V EDF AV K LN+ E S Sbjct: 161 IELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMS 397
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.281e-68 Identity = 129/235 (54.89%), Postives = 172/235 (73.19%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN-EAKKLES 707 +ELPL NPE+F +G++PPKGVLLYGPPGTGKT+LA+A+A+ +A F+ VV+S K++GE AR++RE+F A+ P IIF+DEIDAIG +R GTS +REIQRTLM+LL +LDGFD L VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI I+ + I+ E + +L EGF+GAD++NVC EA AIR R+ V D ++A+ K+N + K+ES Sbjct: 150 VELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRNKMES 384
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.979e-68 Identity = 119/223 (53.36%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671 S+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 200 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.979e-68 Identity = 119/223 (53.36%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 671 S+ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 200 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |