DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.442e-38 Identity = 93/261 (35.63%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG-------EIDYEAVVK--LAEGFNGADLRNVCTEAGMSAIRAE-----------RDYVIHEDFMKAVRKLNEAKKLESSAHYNA 725 +I P+ NP+ F +G+ P G+LL GPPG GKTLLA+A+A+ NF+ V +++ Y+GES R +R++F A++ PC+IF DE+DA+ RR T A R + +LL ++DG + +V ++ ATNRPD++DPA+LRPGRLD+ + + LP R+ ILK I K+G +++ E + + GADL + EA + A+R E V H+ F A +K+ + ++ Y A Sbjct: 595 AILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKT----ITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPSISIKDQVMYEA 848 HSP 2 Score: 158.688 bits (400), Expect = 4.195e-38 Identity = 84/203 (41.38%), Postives = 122/203 (60.10%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 626 + +PE++ +G+ PP+GVLL+GPPG GKTLLA AIA +D LKV + I+ GES + +RE+F A + PCI+F+DEIDAI +R +R I L+ ++ L+ +V +I ATNRPD LDPAL R GR DR++ + +P+E +R IL+ + ++ + L GF GADL +C EA M A+ Sbjct: 283 MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV 485
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.883e-38 Identity = 92/288 (31.94%), Postives = 154/288 (53.47%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAE--RDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE*KHLGKEPRILRQCGYFSDVIVFIFLLKHLALICEVSGS 857 ++E P+ + F+++GI P +G+LL+GPPG KT LA+A A+ A+F + + + Y+GE L+R F AR P IIF DE D + +R E +S + +R L LL ++DG ++ + ++ ATNRP +D AL+RPGR D + +P P+ ++R EIL++H + ++D + + + F GA+L +C E+G ++R V + F A L A +E Y++ F K K +P + + S V F + L L+L+ +G+ Sbjct: 301 AVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSS-FRKAAKRSDSKPIPINKKKATSTVFGFSWQLGVLSLLLLATGN 587 HSP 2 Score: 139.813 bits (351), Expect = 2.017e-32 Identity = 78/219 (35.62%), Postives = 121/219 (55.25%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI 650 I P P +G+K P+G+LLYGPPGTGKT L RA+ DA+ + + ++ + GES +++RE F A H +P +IF+DEID + RR + D I L L++ +V ++ +TNR D +DPAL R GR D +E+ PNE+ R++IL+++ + +D +A+ G+ GADL +C EA +SA + D +I Sbjct: 38 IIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDAR-REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLI 255
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.195e-38 Identity = 89/206 (43.20%), Postives = 123/206 (59.71%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF----DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 L +P F R+G K P+GVLL GPPGTGKT+LARA+A + F + S + Y+G A+ +RE+F AR P IIF+DE+DAIG +R + + +++TL +LL LDGF D V I ATN P+ LDPAL RPGR DR I +PLP+ + R+ IL H + ++D + + GF GADL N+ +A + A Sbjct: 286 LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA---HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYA 488
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.156e-38 Identity = 87/213 (40.85%), Postives = 130/213 (61.03%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA---DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVV-KLAEGFNGADLRNVCTEAGMSAI 626 +I+LPL PELF + G+K G+L YGPPGTGKTLLA+AIA+ NF V +++ YIGES +R +F ARD +PC++F DE+D++ +R ++G S DR + + L EL G D G V +I ATNRPD+LDPALLRPGR D+ + + + + +++IL+ H + +V +L + GAD +C++A + A+ Sbjct: 1009 TIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAV 1220
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 7.156e-38 Identity = 88/219 (40.18%), Postives = 126/219 (57.53%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG----------FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ P++NPE F ++G+KPP G+L +GPPG GKT LA AIA+ F K+ ++ +I G S IRE+F A P I+F+DEIDAIG +R ++ ++ R + +LL +DG G V +I ATNRPD LDPAL R GR + +I + P+E +R EIL + A + G D + + +L GF GADL +V AG AI+ Sbjct: 248 NVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK---RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIK 463 HSP 2 Score: 155.606 bits (392), Expect = 3.551e-37 Identity = 85/205 (41.46%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 15 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVK-LAEGFNGADLRNVCTEAGMSAI 626 P+ P+++ G+ G LLYGPPG GKTL+A+A A+ ANF+ + + +++KY+GES IR +F AR PC+IF DE+DA+ R EG ++R L + L +LDG ++ V +I ATNRPDV+DPA LRPGR + +PLPN R ILK A +D + + K EGF+GADL ++ +A A+ Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV---VERLLNQFLVELDGGER-RNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV 747
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.594e-37 Identity = 83/202 (41.09%), Postives = 123/202 (60.89%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 L NP+ F +G K PKG+LL GPPGTGKTLLARA+A D F S + ++G A IR +F A+ + PC+IF+DE+D++GG+R ++T+++LL ++DGF V +I ATN P+ LD AL+RPGR D ++ +P P+ + R EILK + I +D E + + GF+GA+L N+ +A + A Sbjct: 300 LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIE--FPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKA 499
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.594e-37 Identity = 83/202 (41.09%), Postives = 123/202 (60.89%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 L NP+ F +G K PKG+LL GPPGTGKTLLARA+A D F S + ++G A IR +F A+ + PC+IF+DE+D++GG+R + ++T+ +LL ++DGF V +I ATN P+ LD AL+RPGR D ++ +P P+ + R EILK + I +D E + + GF+GA+L N+ +A + A Sbjct: 300 LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIE--SPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKA 499
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.594e-37 Identity = 83/202 (41.09%), Postives = 123/202 (60.89%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 L NP+ F +G K PKG+LL GPPGTGKTLLARA+A D F S + ++G A IR +F A+ + PC+IF+DE+D++GG+R + ++T+ +LL ++DGF V +I ATN P+ LD AL+RPGR D ++ +P P+ + R EILK + I +D E + + GF+GA+L N+ +A + A Sbjct: 358 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIE--SPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKA 557
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.082e-37 Identity = 88/213 (41.31%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA---DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVV-KLAEGFNGADLRNVCTEAGMSAI 626 +I+LPL PELF + G+K G+L YGPPGTGKTLLA+AIA+ NF V +++ YIGES +R +F ARD +PC++F DE+D++ +R ++G S DR + + L EL G + G V +I ATNRPD+LD ALLRPGR D+ + + + + + + IL+ A H ++ + V +L + GADL +C++A + AI Sbjct: 1045 TIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAI 1256
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATAD2_PONAB (ATPase family AAA domain-containing protein 2 OS=Pongo abelii GN=ATAD2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.551e-37 Identity = 87/214 (40.65%), Postives = 126/214 (58.88%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAG-IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 + PL+ PE+F + I+PP+G L YGPPGTGKTL+ARA+A+ +V + + K++GES R +R +F A +P IIF DEID + R S I TL+ L+ DG D G++ +I ATNR D +DPAL RPGR DR+ LP++++R EILKIH K + E + + G+ GAD++++C EA + A+R Sbjct: 273 VVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALM---DGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALR 483 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |