DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_KLULA (Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis GN=PEX6 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.302e-36 Identity = 87/211 (41.23%), Postives = 130/211 (61.61%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-GFNGADLRNVCTEAGMSAI 626 +I++PL +PELF G+K G+L YGPPGTGKTLLA+AIASN NF V +++ YIGES +R +F ARD +PC+IF DE+D++ +R ++G S + R + +LL +LDG G V +I ATNRPD+LD ALLRPGR D+ + + + + ++ + I+K ID + K + GAD +C++A ++A+ Sbjct: 717 TIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAM 925
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.006e-36 Identity = 92/217 (42.40%), Postives = 134/217 (61.75%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP+ + R E+L+I + ++D ++ + EG++GAD+ NVC +A + A+R Sbjct: 224 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMR 434
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.006e-36 Identity = 92/217 (42.40%), Postives = 134/217 (61.75%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP+ + R E+L+I + ++D ++ + EG++GAD+ NVC +A + A+R Sbjct: 224 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMR 434
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.926e-36 Identity = 94/233 (40.34%), Postives = 139/233 (59.66%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP+ + R E+L+I+ + ++D + + EG++GAD+ NVC +A + A+R + + E+ R Sbjct: 225 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSR 451
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.128e-36 Identity = 84/213 (39.44%), Postives = 135/213 (63.38%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF---DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-GFNGADLRNVCTEAGMSAI 626 +I++P+ +PELF GIK G+L YGPPGTGKTLLA+AIA+N NF V +++ YIGES +R++F ARD +PC++F DE+D++ +R ++G S + + R + +LL +LDG D V ++ ATNRPD+LD ALLRPGR D+ + + + + + + +I++ + H +D + V + F GAD +C++A ++A+ Sbjct: 834 TIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGNQGDS-EGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAM 1044
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 5.128e-36 Identity = 89/236 (37.71%), Postives = 142/236 (60.17%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-----VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEID-YEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNE 689 +I++PL +PELF G+K G+L YGPPGTGKTLLA+AIA+N NF V +++ YIGES +R +F ARD +PC+IF DE+D++ +R ++G S + R + +LL +LDG + V ++ ATNRPD+LD ALLRPGR D+ + + + + ++ + +IL+ +D YE + + F GAD +C+++ ++A+ + V + ++KLNE Sbjct: 854 TIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEVDAK-----IKKLNE 1082
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_MOUSE (Katanin p60 ATPase-containing subunit A1 OS=Mus musculus GN=Katna1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.128e-36 Identity = 93/234 (39.74%), Postives = 140/234 (59.83%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK 680 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP+ + R E+L+I + +++ ++ + EG++GAD+ NVC +A + A+R + + E+ R+ Sbjct: 224 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRE 451
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_YEAST (Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae GN=PEX6 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36 Identity = 84/211 (39.81%), Postives = 131/211 (62.09%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD-QLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-GFNGADLRNVCTEAGMSAI 626 +I++PL +PELF G+K G+L YGPPGTGKTL+A+AIA+N NF V +++ YIGES +R +F AR+ +PC+IF DEID++ +R ++G S + R + +LL +LDG V +I ATNRPD+LD ALLRPGR D+ + + +P+ + ++ IL+ ++ + KL + GAD +C++A ++A+ Sbjct: 747 TIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36 Identity = 93/234 (39.74%), Postives = 140/234 (59.83%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK 680 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP+ + R E+L+I + +++ ++ + EG++GAD+ NVC +A + A+R + + E+ R+ Sbjct: 224 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRE 451
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36 Identity = 92/217 (42.40%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI+ + +I E + + EG++GAD+ NVC +A + A+R Sbjct: 223 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |