DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36 Identity = 92/217 (42.40%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI+ + +I E + + EG++GAD+ NVC +A + A+R Sbjct: 223 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36 Identity = 92/217 (42.40%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI+ + +I E + + EG++GAD+ NVC +A + A+R Sbjct: 223 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS2_METJA (Putative 26S protease regulatory subunit homolog MJ1494 OS=Methanocaldococcus jannaschii GN=MJ1494 PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 84/223 (37.67%), Postives = 140/223 (62.78%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM-SAIRAERDYVIHEDFMKAVRKL 683 L NP+LF G PK VL YGPPGTGKTL+ARA+A+ +++F+ V + +I +++G+++++IRE++ A + PCI+F+DE+DAIG R E S ++ + LL +LDG + V I ATN P +LDPA+ R + +IE LPN++ R++I++++A + + + + V+ +GF+G D++ + + AI +RDYV ED A++K+ Sbjct: 143 LENPKLF---GEWAPKNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIGLSR--EYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKEDLEWALKKI 358
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 97/258 (37.60%), Postives = 147/258 (56.98%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE-QSRMEILKIHAAGIAKHGEIDYEAVVK-LAEGFNGADLRNVCTEAGMSA----IRAERDYVIHED------------FMKAVRKLNEAKKLESSAHYN 722 +I+LPL +P LF GI G+LL+GPPGTGKTLLA+AIA+ NFL V +I+ YIGES + IRE+F AR +PC+IF DE+D++ R G + + R + +LL +LDG + V +I ATNRPD+LD +L+RPGRLDR + + + +E +++ +IL+ ++D VV+ GAD + ++A +A I A + I+E+ F+KAV L + L+ +Y+ Sbjct: 934 TIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSR-GNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLVPSVSLDELEYYH 1189
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 96/248 (38.71%), Postives = 147/248 (59.27%), Query Frame = 3 Query: 27 PELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA-IIDKYIGESARLIREMFGYARDHQPC--------IIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAK----HGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA----IRAERDYVIHEDFMKAVRKLNEAKKLESSAH 716 PEL ++G K KG+LLYGPPGTGKTL+AR I + ++A K+V+ I+DKY+GES +R +F A + + II DEIDAI +R S + + + T++ +LL ++DG DQL + +I TNR D++D ALLRPGRL+ ++EI LPNEQ R++IL IH + + + ++D + + L + F+GA+L + A SA I+A+ + + M+ + K+N L S H Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGS--VAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKL-KVNRDDFLHSLEH 486
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 91/233 (39.06%), Postives = 138/233 (59.23%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF-------DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F + SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D V ++ ATN P +D AL R RL+++I IPLP+ + R E+L+I+ + +++ E + + +G++GAD+ NVC +A + A+R + + E+ R Sbjct: 225 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSR 451
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 91/233 (39.06%), Postives = 138/233 (59.23%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF-------DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ LP+ PE F + +P KGVL+ GPPGTGKTLLA+A+A+ F + SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D V ++ ATN P +D AL R RL+++I IPLP+ + R E+L+I+ + +++ E + + +G++GAD+ NVC +A + A+R + + E+ R Sbjct: 221 AVVLPMWMPEFFKGIR-RPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSR 447
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.492e-35 Identity = 87/243 (35.80%), Postives = 135/243 (55.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADF 731 +IE P P+LF ++ G+LLYGP G GKTLLA AIA NF+ V +++KYIG S + +R++F A +PC++F DE D+I RR + + R + + L QLDG + L V ++ AT+RPD++DPALLRPGRLD+ + +P R++IL + + I E + + + GADLR + A + +I +++ E+ K RK E + ++S+ DF Sbjct: 881 TIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGV---TDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMNHL--EEEKKRKRKEKEDQSNKNSSQQQDDF 1118
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.492e-35 Identity = 91/217 (41.94%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R ++LKI+ + +I E + + EG++GAD+ NVC +A + A+R Sbjct: 223 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.492e-35 Identity = 91/217 (41.94%), Postives = 132/217 (60.83%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI + +I E + + EG++GAD+ N+C +A + A+R Sbjct: 221 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMR 431 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |