DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.949e-35 Identity = 92/217 (42.40%), Postives = 132/217 (60.83%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI + +I E + + EG++GAD+ NVC +A + A+R Sbjct: 223 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDASLMAMR 433
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.545e-35 Identity = 79/203 (38.92%), Postives = 122/203 (60.10%), Query Frame = 3 Query: 18 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 L NPE F ++G K PKGVLL GPPG GKTLLA+A++ FL S+ + +G A IR++F A+ + PC++F+DEID++GG R FS +T+ +LL ++DGF + ++ ATN+ +VLD ALLRPGR D +I + P + R+ +L ++ + ID E + G+ GAD++N+ +A ++A Sbjct: 185 LRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHPF---ANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAA 384
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35 Identity = 86/218 (39.45%), Postives = 126/218 (57.80%), Query Frame = 3 Query: 15 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEI--DYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 647 P++ PE+F + I PPKGV+ YGPPGTGKTL+ARA+A+ KV + + K++GES R +R +F A +P IIF DEID + R S+ I TL+ L+ DG D G+V +I ATNR D LDPAL RPGR DR++ LP+ +R IL IH + ++ + + + G+ GADL+ +CTE+ + +R+ ++ Sbjct: 424 PMLYPEVFAKFKINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALM---DGLDGRGEVVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCTESVLIGLRSRYPHI 638
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35 Identity = 98/244 (40.16%), Postives = 140/244 (57.38%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-------GFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA 713 +I+LPL +PEL L +G++ G+LL+GPPGTGKTLLA+A+A+ FL V +I+ Y+G+S +RE+F AR PCIIF DE+D++ R G S + R + +LL +LDG V +I ATNRPD+LDPALLRPGR D+ + + + R L++ +A K EA V LA GADL ++C++A M+A++ + VR L E +L SSA Sbjct: 721 TIQLPLEHPEL-LSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG-VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA--SEDRASQLRVLSAITRK---FKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALK------------RRVRDLEEGLELRSSA 944
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35 Identity = 79/211 (37.44%), Postives = 129/211 (61.14%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVK----LAEGFNGADLRNVCTEAGMSAI 626 IE P+ ++ + ++ P G+LL+G PG GKT LA AI+S F+ + ++DKYIG+S + +R++F A+ +PC++F DE D++ RR + T R + ++L Q+DG + L V ++ AT RPD++DPALLRPGRLD+ I LPNE+ R+E+L+ +A I+ A++K L +G+ ADL ++ +A + A+ Sbjct: 622 IESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGV---TDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQ----KLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAV 825
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35 Identity = 90/217 (41.47%), Postives = 131/217 (60.37%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V SS + KY GES +L+R +F AR + P IF+DEID+I RR GTS + E R + ELL Q+DG D K+ M++ ATN P +D AL R RL+++I IPLP + R E+LKI + ++ E + EG++GAD+ N+C +A + A+R Sbjct: 221 AVVLPMWMPDFFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMR 431
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATD2B_HUMAN (ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35 Identity = 86/214 (40.19%), Postives = 124/214 (57.94%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVV-----SSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAG-IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 + PL+ PE+F + I+PP+G L YGPPGTGKTL+ARA+A+ KV + + K++GES R +R +F A +P IIF DEID + R S I TL+ L+ DG D G++ +I ATNR D +DPAL RPGR DR+ LP++++R IL+IH K + + + G+ GAD++ +CTEA + A+R Sbjct: 416 VVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALM---DGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALR 626
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.671e-35 Identity = 96/261 (36.78%), Postives = 154/261 (59.00%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGF------DQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE*KHLGKE 761 ++ LPL P+ F + +P KGVL+ GPPGTGKT+LA+A+A+ F V S+++ KY GES +L+R +F AR + P IF+DEID+I +R GT ++ E R + ELL Q+DG ++ K+ M++ ATN P +D AL R RL+++I IPLP R ++L+I+ + +ID +++ + +G++GAD+ NVC +A M A+R R + + ++ + K E + + A + K K +GKE Sbjct: 249 AVVLPLWMPDYFKGIR-RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKR---GTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMR-RRIQGLRPEEIRHIPK-EELNQPSTPADFLLALQKVSKSVGKE 501
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.650e-34 Identity = 88/230 (38.26%), Postives = 137/230 (59.57%), Query Frame = 3 Query: 6 IELPLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM--ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDY--EAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV--IHEDFMKAV 674 + LP P++F G++ PPKGVLL+GPPGTGKT++ R +AS A F + +S++ K++GE +L+R +F AR P +IF+DEID++ R + R I+ E L QLDG + ++++ ATNRP LD A R R +++ I LP SR +I++ G +H D+ E + +L +G++GAD+R +CTEA M IR D + I++D ++AV Sbjct: 332 VVLPFQRPDIF--TGLRAPPKGVLLFGPPGTGKTMIGRCVASQAQATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSARSESEHESSRRIK---TEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPDSRTQIVENLLRG-TRHEITDHNLEKIRRLTDGYSGADMRQLCTEAAMGPIREIGDQIATINKDDIRAV 553
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.814e-34 Identity = 82/213 (38.50%), Postives = 130/213 (61.03%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQL---GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-GFNGADLRNVCTEAGMSAI 626 +IE+PL +PELF + G+K G+L YGPPGTGKTLLA+AIA+N NF V +++ YIGES +R +F ARD +PC+IF DE+D++ +R ++G S + R + +LL +LDG V ++ ATNRPD+LD ALLRPGR D+ + + + + + + +I++ +D + + + GAD +C++A ++A+ Sbjct: 828 TIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAM 1038 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |