DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.824e-33 Identity = 75/208 (36.06%), Postives = 122/208 (58.65%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 626 ++E P +F ++ G+LLYG PG GKTLLA A+A+ NF+ + I++KYIG S + +RE+F A+ +PCI+F DE D+I +R + T R + ++L Q+DG + L V ++ AT+RPD++D ALLRPGRLD+ + +P+ R++IL+ + ++ +V GF+GADL+ + A + A+ Sbjct: 814 TLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV---TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAV 1018
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.824e-33 Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGI-KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 S+ PLM PE++ + + P GVLLYGPPG GKT+LA+A+A ANF+ + S+I+DK+ GES +++ MF A QPCIIF+DEID+ E +S D E+ TL E + DG G+V +I ATNR + +D A LR RL ++ + LP R +IL + E D + + +GF+G+DL+ +C EA + A + Sbjct: 106 SVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSF----LRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAK 311
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.824e-33 Identity = 89/259 (34.36%), Postives = 142/259 (54.83%), Query Frame = 3 Query: 15 PLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG--FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI-LKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD---------------YVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 P+M P++F G++ PPKG+LL+GPPGTGKTL+ + IAS A F + +S++ K++GE +++R +F AR QP +IF+DEID++ +R G +R E L QLDG ++ ++ ATNRP +D A R RL +++ IPLP +R +I + + + + + E VV+ ++GF+GAD+ +C EA + IR+ Y+ E+ + VR K LE ++N FG Sbjct: 423 PMMRPDIF--TGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR---GDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIRSLHTADIATISPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFG 674
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.111e-33 Identity = 88/215 (40.93%), Postives = 134/215 (62.33%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDG----FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LPL+ PE F G++ P K ++L GPPGTGKTL+ARAIAS + F V S+ + K+ G+S +++R +F AR + P IIF+DEID +GG+R G S + E R + E L Q+DG FD +V ++ ATN P LD AL R R +++I IPLP+ +R ++++ G K EI+Y+ + EGF+GAD+ ++C A ++ +R Sbjct: 208 AVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR---GNSGEHEASRRVKSEFLVQMDGSQNKFDS-RRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.111e-33 Identity = 87/259 (33.59%), Postives = 142/259 (54.83%), Query Frame = 3 Query: 15 PLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG--FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI-LKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERD---------------YVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 P++ P++F G++ PPKG+LL+GPPGTGKTL+ + IAS A F + +S++ K++GE +++R +F AR QP +IF+DEID++ +R G +R E L QLDG ++ ++ ATNRP +D A R RL +++ IPLP +R +I + + + E + E +V+ ++ F+GAD+ +C EA + IR+ + Y+ E+ + VR K LE ++N FG Sbjct: 420 PMLRPDIF--TGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR---GDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFG 671
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.307e-33 Identity = 89/263 (33.84%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLN---EAKKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK ++K G E + + +L EG++G+D+ + +A + IR +E + + DF+ +++K+ LES +N +FG Sbjct: 347 LPSIRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLK---NLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNIKYSDFLSSLKKIKCSVSPSTLESYIRWNKEFG 599
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.307e-33 Identity = 90/263 (34.22%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLN---EAKKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK ++K G E + + +L EG++G+D+ + +A + IR +E + + DF+ +++K+ LES +N DFG Sbjct: 344 LPSIRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLK---NLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNMKYSDFLGSLKKIKCSVSHSTLESYIRWNQDFG 596
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32 Identity = 79/210 (37.62%), Postives = 133/210 (63.33%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P+LF G KP G+LLYGPPGTGK+ LA+A+A+ + F + SS ++ K++GES RL+R++F AR+ +P IIF+DEID++ G R + + R I+ + +N + G D+ G V ++ ATN P LD A+ R R +++I IPLPN +R + +++ I ++ D++ + K+ +G++G+D+ V +A M +R Sbjct: 144 TVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVR 348
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32 Identity = 88/263 (33.46%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK + K G + + + +L +G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 357 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRERREGEHDASRRLK---TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLK---NLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 609
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32 Identity = 89/264 (33.71%), Postives = 145/264 (54.92%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ EG++G+DL + +A + IR E+D+ + +K +R+ + L S ++ D+G Sbjct: 520 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDF---HNSLKRIRRSVAPQSLNSYEKWSQDYG 773 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |