DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32 Identity = 83/211 (39.34%), Postives = 126/211 (59.72%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ-SRMEILKIHAAGIAKHGEIDYEAVVKLA-EGFNGADLRNVCTEAGMSAIR 629 +I+LPL +PEL L +G++ G+LL+GPPGTGKTLLA+A+A+ FL V +I+ Y+G+S +RE+F AR PCIIF DE+D++ R G S + R + +LL +LDG V +I ATNRPD+LDPALLRPGR D+ + + ++ S++ +L + V+ GADL ++C++A +A++ Sbjct: 720 TIQLPLEHPEL-LSLGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG-VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALK 927 HSP 2 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 49/185 (26.49%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 69 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 623 VLL GPPG GKT + A S++ + LKV S++ + G ++ +F AR +P ++ + +D +G R +G D + L LL D + + ++ T+R L PA ++ ++E+P +E R+ IL+ A + E++ + + GF DL + T + +A Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLG--RDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL-PADVQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAA 646
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32 Identity = 88/261 (33.72%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ +G++G+DL + +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 501 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQDYG 754
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32 Identity = 88/261 (33.72%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ +G++G+DL + +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 501 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQDYG 754
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32 Identity = 88/261 (33.72%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ +G++G+DL + +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 501 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQDYG 754
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32 Identity = 88/261 (33.72%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D EA + K+ +G++G+DL + +A + IR + + +DF +K +R+ + L S ++ D+G Sbjct: 501 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQDYG 754
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32 Identity = 86/263 (32.70%), Postives = 153/263 (58.17%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM--ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G+ ++++ ATNRP LD A+LR R +++ + LPNE++R+ +LK ++K G + + + ++ +G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 357 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLK---NLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAYIRWNKDFG 609
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.017e-32 Identity = 90/262 (34.35%), Postives = 147/262 (56.11%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEAVVKLA---EGFNGADLRNVCTEAGM----------------SAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + + K G +D EA+ +LA +G++G+DL + +A + SA+RA + H +K +R+ + L S ++ D+G Sbjct: 513 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLL---SRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITESDFHSS-LKRIRRSVAPQSLNSYEKWSQDYG 766
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.634e-32 Identity = 87/263 (33.08%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK + K G + + + ++ +G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 325 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLK---NLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 577
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 2.634e-32 Identity = 87/263 (33.08%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK + K G + + + ++ +G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 358 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLK---NLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 610
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.634e-32 Identity = 87/263 (33.08%), Postives = 151/263 (57.41%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 734 LP + PELF G++ P +G+LL+GPPG GKT+LA+A+A+ +A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK + K G + + + ++ +G++G+DL + +A + IR +E + DF ++++K+ + + LE+ +N DFG Sbjct: 360 LPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLK---NLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 612 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |