DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.230e-31 Identity = 89/263 (33.84%), Postives = 148/263 (56.27%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA-----------ERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 S+ LP + P++F G++ PPKG+LL+GPPG GKT++A+A+A F + SS++ KY+G+ +L+R +F A QP IIF+DEID++ R S + A R ++ E+L Q DG G +V ++ ATNRP+ LD A LR RL ++I + LP ++R++I++ H +H + ++ ++ +G++G DL +C +A IR E + +DF +K +R ++ L+S +N FG Sbjct: 399 SVILPNLRPDVF--TGLRAPPKGLLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFIDEIDSLLTERSSNESEASRRLK---TEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR--RLVKRIYVGLPELETRLQIIQ-HLLVGQRHSLTKQQINSLAEVTQGYSGFDLAALCKDAAYEPIRRLGIGIKDLELNEISLISFKDFANSLKQIRPSVTSQSLKSFEKWNQKFG 653
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.912e-31 Identity = 81/210 (38.57%), Postives = 130/210 (61.90%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ LP+ P LF + KP G+LLYGPPGTGK+ LA+A+A+ ++ F V SS ++ K++GES +L++++F AR+++P IIF+DE+DA+ G R + A R I+ L+ +N + G D G V ++ ATN P LD A+ R R +R+I IPLP+ +R + +I+ + DY + + EG++G+D+ V +A M IR Sbjct: 148 AVILPVKFPHLF-KGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGV-GNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIR 352
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.912e-31 Identity = 81/232 (34.91%), Postives = 134/232 (57.76%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQL---------GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK-IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMK 668 ++ P + P+LF + +P +G+LL+GPPGTGKT++A+A+A+ ++ F V +S+++ KY+GES +L+R +F A+ P IIF+DEID++ R + R I+ L+ + L +V ++ ATN P +D A R R RK+ IPLP+ ++R+ LK + A ++DYE + ++ EGF+G+DL ++ EA M IR D ++ DF K Sbjct: 486 AVVYPFLRPDLFKGLR-EPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDK 714
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_DROPE (Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.912e-31 Identity = 86/261 (32.95%), Postives = 145/261 (55.56%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D +A + K+ +G++G+DL + +A + IR ++ +DF +K +R+ + L +++D+G Sbjct: 531 LPSVRPELF--TGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDINAMRHITEKDFHNSLKRIRRSVAPQSLSLYEKWSSDYG 784
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.912e-31 Identity = 86/242 (35.54%), Postives = 130/242 (53.72%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGI-KPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR-------AERDY---VIHEDFMKAVRKLNEAK 695 ++ LP+ LF + +PPKGVLLYGPPG GKTL+A+A A F+ + S + DK+ GES +L +F A QP IIF+DEID+ R S A ++ M L + LD D +V ++ ATNRP LD A+LR R+ + I PN + R +ILK+ ++ + K +GF+G+DLR +C +A + +R E D+ + ED +A+ K+ ++K Sbjct: 110 TVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEEDFIRPIRQEDLQRAIEKMKKSK 348
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.803e-31 Identity = 78/199 (39.20%), Postives = 116/199 (58.29%), Query Frame = 3 Query: 51 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV 647 ++PPKGVLLYGPPG GKTL+A+A A F+ + +S + DK+ GES +L +F A QPCIIF+DEID+ R S A ++ M L + LD + +V ++ ATNRP +D A+LR R+ + LPN R EIL++ +G I+ + + +EG++G+DL+ +C +A M + RDYV Sbjct: 126 LQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGEN-SQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRV---RDYV 318
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31 Identity = 82/259 (31.66%), Postives = 140/259 (54.05%), Query Frame = 3 Query: 12 LPLMNPELFLRVGIKPP-KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYN---ADFG 734 LP + PELF G++ P KG+LL+GPPG GKTLLARA+A+ A F + ++ + KY+G+ +L+R +F AR+ QP IIF+DE+D++ R S A R ++ + + L + ++ ++ ATNRP LD A LR R +++ + LP+ +R +L+ + G + + D + +L EG++G+DL + +A + IR + + DF +++++ + +S A Y DFG Sbjct: 521 LPSVRPELF--TGLRTPAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALR--RFPKRVYVTLPDRDTRELLLRRLLQKQG-SPLSDADLAHLAQLTEGYSGSDLTALARDAALEPIRELNVEEVKNMDPTKLRSIRESDFHNSLKRIRRSVAPQSLAAYEKWLQDFG 774
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31 Identity = 78/203 (38.42%), Postives = 127/203 (62.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI----------DAN-----FLKVVSSAIIDKYIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI--------LKIHAAGIAK 527 ++ELP ++ EL+ ++PPKGVLLYGPPG GKTL+A+A+A+++ DA+ FL + +++K++GE+ R IR +F AR+ P I+F DE+D+I R GT +++ T++ +LL+++DG + L V +I A+NR D++DPA+LRPGRLD KI+I P+ ++ +I L +HA +A+ Sbjct: 267 AVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAE 466
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31 Identity = 78/203 (38.42%), Postives = 127/203 (62.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI----------DAN-----FLKVVSSAIIDKYIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI--------LKIHAAGIAK 527 ++ELP ++ EL+ ++PPKGVLLYGPPG GKTL+A+A+A+++ DA+ FL + +++K++GE+ R IR +F AR+ P I+F DE+D+I R GT +++ T++ +LL+++DG + L V +I A+NR D++DPA+LRPGRLD KI+I P+ ++ +I L +HA +A+ Sbjct: 267 AVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAE 466
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31 Identity = 77/218 (35.32%), Postives = 130/218 (59.63%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEIL--------KIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 629 ++ P+ P+LF + + P KG+LLYGPPGTGKTLLA+A+A+ F + +S I+ K+ G+S +L+R +F AR H P IF+DE++++ +R R ELL Q+DG + + ++ A+N P LD A+LR RL+++I + LP++++R ++ K HA + H +++Y + + EG++G+D++ VC EA M +R Sbjct: 270 AVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMIYHWLPPVSKNHA--LELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVR 482 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |