DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.609e-64 Identity = 117/232 (50.43%), Postives = 165/232 (71.12%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 +I LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + VC EAGM A+R + HED+M+ + ++ KK Sbjct: 201 AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKK 432
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 245.743 bits (626), Expect = 2.609e-64 Identity = 117/232 (50.43%), Postives = 165/232 (71.12%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 +I LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + VC EAGM A+R + HED+M+ + ++ KK Sbjct: 201 AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKK 432
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.609e-64 Identity = 116/232 (50.00%), Postives = 165/232 (71.12%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 +I LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + VC EAG+ A+R + HED+M+ + ++ KK Sbjct: 166 AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKK 397
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.451e-64 Identity = 122/239 (51.05%), Postives = 166/239 (69.46%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 719 ++ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+LA A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I A + E+D E V + +GAD+ +C EAGM+A+R R V+ +DF K + N KK ES + Sbjct: 177 AVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYK--NNIKKDESEYEF 413
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.916e-64 Identity = 118/225 (52.44%), Postives = 162/225 (72.00%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + L+ ++GI PP+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE RL+R++F AR++ P IIF+DEIDAI +RF T ADRE+QR LMELLNQ+DGFD VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I ++ + + E+D E V + +GA+++++C EAGM AIR R ++ +DF K + Sbjct: 165 AVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYK 389
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 9.916e-64 Identity = 121/239 (50.63%), Postives = 171/239 (71.55%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 719 +I LP+ + F +GI+ PKG L+YGPPGTGKTLLARA A+ +A FLK+ + ++ YIGE A+L+R+ F A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLNQLDGF +VK++ ATNR DVLDPALLR GRLDRKIE PLP+E SR +IL+IH+ + +I+++ + + + FNGA L+ V EAGM A+R + V HEDF++ + ++ +A+K +S + Y Sbjct: 196 AIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEV-QARKSKSVSFY 433
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.916e-64 Identity = 117/232 (50.43%), Postives = 164/232 (70.69%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 698 +I LP+ + E F +GI+PPKGVL+YGPPGTGKTLLARA A+ A FLK+ ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D+LDPALLR GRLDRKIE P+PNE++R I++IH+ + +++YE + + + FNGA + VC EAGM A+R + HED M+ + ++ KK Sbjct: 204 AIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKKK 435
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 2.885e-63 Identity = 114/229 (49.78%), Postives = 164/229 (71.62%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNE 689 ++ELP+ +P LF VGI PP GVLL+GPPGTGKTL+A+A+AS DA+F+K+ S ++ K+IGE A+L+R++F ARDH+P ++F+DEIDAI +R TS D E+QRT+M+LL+++DGFD+ G +++I ATNR D+LD A+LRPGR DR IE+P PN R +I +IH + +D+ + +GAD++ +CTEAGM AIR +R V +DF A KL++ Sbjct: 164 TVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKLDQ 392
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.768e-63 Identity = 115/227 (50.66%), Postives = 163/227 (71.81%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 683 ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A+N A+F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + + + ++D E V + +GAD+ ++C EAGM A+R R V+ +D KA + + Sbjct: 176 AVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNV 402
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.768e-63 Identity = 115/231 (49.78%), Postives = 166/231 (71.86%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK 695 +I LP+ + F ++G+KPPKG L++GPPGTGKTLLARA A+ +A FLK+ + ++ +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDGF +VK+I ATNR D LDPALLR GRLDRK+E PLPNE++R+ IL+IH+ +A +I++E + + + +NGA L++VC EAGM A+R + HE FM + ++ K Sbjct: 200 AIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRK 430 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |