CN185912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS15A_SCHPO (40S ribosomal protein S15-A OS=Schizosaccharomyces pombe GN=rps15a PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.028e-53 Identity = 99/140 (70.71%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 115 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 L KKR+F+ F++RGV+L+ LLD+S ++LV LF ARARRR RGL I+KLRKAK EAP EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL EFSI+YKP KHGRPGIGATHSSRFIPLK Sbjct: 14 LRKKRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 153
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS15_CAEEL (40S ribosomal protein S15 OS=Caenorhabditis elegans GN=rps-15 PE=1 SV=3) HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52 Identity = 99/140 (70.71%), Postives = 115/140 (82.14%), Query Frame = 1 Query: 115 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 L KKRTF+KF +RGVDLD LLDMS ++ KL R RRR RGLKRK +ALI K++KAK+ A EKP V+THLR+MII+PE++G +IG+YNGK FNQ EIKPEMIG YL EF+ISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 12 LKKKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS15_YEAST (40S ribosomal protein S15 OS=Saccharomyces cerevisiae GN=RPS15 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.516e-47 Identity = 92/138 (66.67%), Postives = 108/138 (78.26%), Query Frame = 1 Query: 121 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 KKR FK S+RGVDL+ LL+MS ++ VKL AR RRRF RG+ KP +KKLR AK AP EKP PVRTH+RNMIIVPEMIGS++G+YNGK FNQVEI+PEM+GHYL EFSI+Y PV+HGR G +SRFIPLK Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG---ATTSRFIPLK 142
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS156_ARATH (40S ribosomal protein S15-6 OS=Arabidopsis thaliana GN=RPS15F PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.860e-46 Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 1 Query: 121 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEK--PEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGA----THSSRFIPLK 534 KKRTFKKFSFRG ++DALL MSN +L KLF+AR RRRF RGLK++P+ LIKKLR+AK+EA K PE V+THLRNMIIVPEMIGS++GV+NGK FN++ IKPEMIGHYLAEFS++ K V H RP I S+RFIPL+ Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS15_DICDI (40S ribosomal protein S15 OS=Dictyostelium discoideum GN=rps15 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.200e-45 Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 1 Query: 121 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPP-GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 KKRTFKKF++ GV L++LLD+ ++L+ L RARR+ +R K + +KK R +K GEKP V+TH RN++IVPEMIGS+IG+YNGK FNQVE+KPEMIGHY EFS+SYK V HGRPGIGATHSSRFIPLK Sbjct: 6 KKRTFKKFTYSGVALESLLDLKEEQLISLLRCRARRKLRRETPIKHVNFLKKCRASKAAVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVKPEMIGHYTGEFSLSYKSVNHGRPGIGATHSSRFIPLK 144
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS15_NAEGR (40S ribosomal protein S15 (Fragment) OS=Naegleria gruberi GN=RPS15 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 181 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 M NDEL LF++ RR +G+ +K LI+K +K + AP GEKP+ V+THLR+MII+P MIG +IGVY GK + VEIKPEM+G L++FS++Y+PVKHG+P IGAT SS F+PLK Sbjct: 3 MENDELKNLFTSALRRIIGKGISKKYKTLIEKAQKKRDTAPYGEKPDAVKTHLRDMIILPSMIGCVIGVYQGKDYVSVEIKPEMVGMKLSDFSLTYRPVKHGKPSIGATSSSGFVPLK 120
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_THEGJ (30S ribosomal protein S19P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps19p PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 69/133 (51.88%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+F +RG LD LL+MS +E KL AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MI++PEM+G I V+NGK F +EIKPEMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGITIHVHNGKEFVPIEIKPEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAVK 133
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_PYRFU (30S ribosomal protein S19P OS=Pyrococcus furiosus GN=rps19p PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 70/133 (52.63%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+F +RG L+ L++MS +EL +LF AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MII+PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PG+GAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLFPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKKVEHGAPGVGATRSSMFVAVK 132
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_PYRKO (30S ribosomal protein S19P OS=Pyrococcus kodakaraensis GN=rps19p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32 Identity = 69/133 (51.88%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+F +RG LD LL+MS +E KL +R RR +RGL + L++K+R AK+ G+ +P+RTH R+MI++PEM+G I VYNGK F VEIK EMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPSRQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFAMTRKVVQHGSPGVGATRSSMFVAVK 133
BLAST of CN185912 vs. ExPASy Swiss-Prot
Match: RS19_PYRAB (30S ribosomal protein S19P OS=Pyrococcus abyssi GN=rps19p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 70/133 (52.63%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 136 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 534 K+F +RG L+ L++MS +EL KL AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MI++PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PGIGAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELAKLLPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYNKPIRTHCRDMIVLPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK 132 The following BLAST results are available for this feature:
BLAST of CN185912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185912 ID=CN185912; Name=CN185912; organism=Citrus sinensis; type=EST; length=714bpback to top |