CN185901

Overview
NameCN185901
Unique NameCN185901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2611 contig Csv1_Contig2611:202..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = -3
Query:  414 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 632
            PR   QT S +DILDDGYRWRKYGQK VK N  PRSYY+CT  GC V+K V+R  +D   V+TTYEG H H I
Sbjct:  220 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQI 292          

HSP 2 Score: 72.0182 bits (175), Expect = 3.927e-12
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = -3
Query:  402 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERST 590
            DDGY WRKYGQK VK ++ PRSY++CT+  C  KK+V+       ++   Y+G H+HP  +ST
Sbjct:  117 DDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHPKPQST 179          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = -3
Query:  417 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 632
            P+ +F TRS+V  LDDGY+WRKYGQK VK++ FPR+YYRCT   C+VKK+V+R   D   V+TTYEG H+HP
Sbjct:  104 PKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTTTWCDVKKRVERSFSDPSSVITTYEGQHTHP 175          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = -3
Query:  420 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 629
            R AF+TRS++D++DDG++WRKYG+K+VKNN   R+YY+C+ +GC+VKK+V+R   D   V+TTYEG+H+H
Sbjct:   97 RVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNH 166          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = -3
Query:  420 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 629
            R AF+TRS+V++LDDG++WRKYG+K VKN+  PR+YY+C+  GC VKK+V+R   D   V+TTYEG H+H
Sbjct:  100 RVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = -3
Query:  384 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDNFEHI 632
            PR   QT S +DILDDGYRWRKYGQK VK N  PRSYY+CT  GC V K V+R + D   V+TTY G H+H +  +  N  H+
Sbjct:  358 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVVP-AARNSSHV 439          

HSP 2 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = -3
Query:  420 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 590
            DDGY WRKYGQK VK +++PRSYY+CTH  C  KK+V+R +++  ++   Y G H H
Sbjct:  178 DDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVER-SREGHIIEIIYTGDHIH 233          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.646e-18
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = -3
Query:  420 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 629
            R    T++  DI++DGYRWRKYGQK+VK + +PRSYYRC+  GC VKK V+R + D  +++TTYEG H H
Sbjct:  294 RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDH 363          

HSP 2 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  417 ILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 596
            +++DGY WRKYGQK VK N+F RSYYRCTH  C  KKQ++R    + VV T Y G H HP
Sbjct:  109 VMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQ-VVDTVYFGEHDHP 167          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.377e-17
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = -3
Query:  396 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDN 629
            R + + RS+  +L DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+  +  N
Sbjct:  279 RVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMN 357          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = -3
Query:  414 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 629
            R + + RS+  ++ DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  299 RVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPL 371          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = -3
Query:  414 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 629
            R + + RS+  ++ DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  284 RVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPL 356          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = -3
Query:  417 YAFQTRSQVD---ILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 626
            + F+T+S +D    LDDGY+WRKYG+K +  + FPR Y++C+   CNVKK+++R T +   ++TTYEG H+HP
Sbjct:   94 HVFKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHP 166          
The following BLAST results are available for this feature:
BLAST of CN185901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK26_ARATH2.077e-2163.01Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK68_ARATH7.894e-2161.11Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRK51_ARATH1.759e-2057.14Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK50_ARATH3.918e-2058.57Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK34_ARATH3.918e-2055.42Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRKY1_ARATH1.646e-1855.71WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK42_ARATH2.377e-1750.63Probable WRKY transcription factor 42 OS=Arabidops... [more]
WRKY6_ARATH3.104e-1752.05WRKY transcription factor 6 OS=Arabidopsis thalian... [more]
WRK31_ARATH4.054e-1752.05Probable WRKY transcription factor 31 OS=Arabidops... [more]
WRK59_ARATH9.032e-1747.95Probable WRKY transcription factor 59 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185901 ID=CN185901; Name=CN185901; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTTCTTATGCAAATGTTTGATAGATAATAGTTAACTCT
TAATGGCCTAGAAACTGAAGTAGATTAAAAAAAAAATCCCATAAAAAGAG
AACAAAATAATGAACCAAATCACCAATGCAGGCAAGTTCTGTTTCTAAAT
TCTAATGACTGCACACAGTACAACAAACTAAAAGGCATTGCCATAAAAAT
ACAACATGTGTTCAAATTATACTAGAGAAGTATCCTGCCCAGTGCTCTGG
AAATTTTATTTCGAGGGTTCAAGTTTATGGATGCTAGATAATTTACAACG
TATTAAGAAGTATCTAGCCCTTTACTGCTGCTTGCTAGTTGAGGAGTGAA
TTAATAAGAAGTGTAGATTTGCATCTGGTTCAAGATGTGCTCGAAGTTAT
CAGTTGATCTCTCGATGGGATGTGAATGCATTCCTTCGTAAGTTGTCACC
ACAACTCCTTCATCTTTGGTTAGTCGTTGAACTTGCTTCTTCACATTGCA
GCCTTGATGCGTGCATCGGTAGTAGCTTCTTGGAAACTTGTTGTTTTTAA
CAGCTTTTTGGCCATACTTTCGCCATCTATAGCCATCATCAAGTATATCA
ACTTGGCTTCGTGTTTGAAAAGCATATCTTGGCTTTCTCACCTTCTTCTC
TCCCTTTTTAATCTTTCCCATTTTCTCTCCGTTTTCAGACCCTGTTTCGT
ACAATAAAGAGCCCTCTATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCA
ATCAACATGT
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