CN185901

Overview
NameCN185901
Unique NameCN185901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2611 contig Csv1_Contig2611:202..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = -3
Query:  414 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 629
            R + + R +   ++DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  222 RVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPL 294          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = -3
Query:  417 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 629
            R   Q  S  D  +DGYRWRKYGQK VK N  PRSY++CT+  C VKK V+R   +  +VVTTY+G+H+HP
Sbjct:  294 RIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHP 364          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -3
Query:  405 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERS 629
            R + + RS    ++DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  ++ TTYEG H+HP+  S
Sbjct:  226 RVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPS 301          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.986e-16
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = -3
Query:  405 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERS 629
            R + ++R +   ++DG +WRKYGQK  K N  PR+YYRCT    C V+KQVQR ++D  ++++TYEG H+HP+  S
Sbjct:  178 RVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMS 253          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.986e-16
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  420 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 599
            D L+DG+RWRKYGQK V  N +PRSYYRCT   C  +K V+R + D    +TTYEG H+H
Sbjct:  346 DSLEDGFRWRKYGQKVVGGNAYPRSYYRCTSANCRARKHVERASDDPRAFITTYEGKHNH 405          

HSP 2 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = -3
Query:  420 DGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 587
            DGY WRKYGQK VK ++ PRSYY+CTH  C VKK+V+R  + + V    Y+G H+H
Sbjct:  166 DGYNWRKYGQKQVKGSECPRSYYKCTHPKCPVKKKVERSVEGQ-VSEIVYQGEHNH 220          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK49_ARATH (Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.304e-15
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = -3
Query:  420 RYAFQTRSQVD-ILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 629
            RY  + ++  + + DDGY+WRKYGQK++KN+  PRSYY+CT+  CN KKQV+R   +    + TYEG H H
Sbjct:  100 RYTLKVKNNSNGMCDDGYKWRKYGQKSIKNSPNPRSYYKCTNPICNAKKQVERSIDESNTYIITYEGFHFH 170          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  405 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERS 629
            R   + R     ++DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR   D  +++TTYEG HSH +  S
Sbjct:  214 RVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLS 289          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.795e-15
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = -3
Query:  420 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 629
            ++       V I  DGYRWRKYGQK VK N  PR+YYRCT  GC V+K ++   ++   V+ TY+G+H+H
Sbjct:  318 KFVVHAAGDVGICGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVENTKAVIITYKGVHNH 387          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  396 ILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDN 596
            ++ DGY+WRKYGQK  ++N  PR+Y++C     C+VKK+VQR  +D+ V+V TYEG H+HP+    D+
Sbjct:  144 VVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDS 211          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRKY1_DICDI (Probable WRKY transcription factor protein 1 OS=Dictyostelium discoideum GN=wrky1 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = -3
Query:  402 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERST 599
            +I+ DGY+WRKYGQK VK +  PR YY+CT QGCNV+KQV+R+  D     T Y+G H H   ++T
Sbjct:  811 NIVSDGYQWRKYGQKNVKGSLHPRHYYKCTFQGCNVRKQVERI-GDTNQNSTVYKGEHCHGFPQTT 875          

HSP 2 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = -3
Query:  378 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH------PIERSTDNFEHILN 629
            +   +T S +D LDDG+ WRKYGQK+VK + FP+SY++C    C VKKQV    + +   + TY G H+H       IE+   +F  + N
Sbjct: 1098 KLVIETGSSIDHLDDGFFWRKYGQKSVKGSPFPKSYFKCAELTCPVKKQV---IQQDSKYINTYRGKHNHDPPESEAIEKRKKHFNGLYN 1184          
The following BLAST results are available for this feature:
BLAST of CN185901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRKY9_ARATH2.628e-1650.68Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK10_ARATH2.628e-1654.93Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK47_ARATH3.432e-1651.32Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK61_ARATH9.986e-1647.37Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK44_ARATH9.986e-1656.67WRKY transcription factor 44 OS=Arabidopsis thalia... [more]
WRK49_ARATH1.304e-1549.30Probable WRKY transcription factor 49 OS=Arabidops... [more]
WRK72_ARATH2.225e-1550.00Probable WRKY transcription factor 72 OS=Arabidops... [more]
WRK32_ARATH3.795e-1547.14Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK40_ARATH1.104e-1448.53Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRKY1_DICDI7.157e-1453.03Probable WRKY transcription factor protein 1 OS=Di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185901 ID=CN185901; Name=CN185901; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTTCTTATGCAAATGTTTGATAGATAATAGTTAACTCT
TAATGGCCTAGAAACTGAAGTAGATTAAAAAAAAAATCCCATAAAAAGAG
AACAAAATAATGAACCAAATCACCAATGCAGGCAAGTTCTGTTTCTAAAT
TCTAATGACTGCACACAGTACAACAAACTAAAAGGCATTGCCATAAAAAT
ACAACATGTGTTCAAATTATACTAGAGAAGTATCCTGCCCAGTGCTCTGG
AAATTTTATTTCGAGGGTTCAAGTTTATGGATGCTAGATAATTTACAACG
TATTAAGAAGTATCTAGCCCTTTACTGCTGCTTGCTAGTTGAGGAGTGAA
TTAATAAGAAGTGTAGATTTGCATCTGGTTCAAGATGTGCTCGAAGTTAT
CAGTTGATCTCTCGATGGGATGTGAATGCATTCCTTCGTAAGTTGTCACC
ACAACTCCTTCATCTTTGGTTAGTCGTTGAACTTGCTTCTTCACATTGCA
GCCTTGATGCGTGCATCGGTAGTAGCTTCTTGGAAACTTGTTGTTTTTAA
CAGCTTTTTGGCCATACTTTCGCCATCTATAGCCATCATCAAGTATATCA
ACTTGGCTTCGTGTTTGAAAAGCATATCTTGGCTTTCTCACCTTCTTCTC
TCCCTTTTTAATCTTTCCCATTTTCTCTCCGTTTTCAGACCCTGTTTCGT
ACAATAAAGAGCCCTCTATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCA
ATCAACATGT
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