DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28 Identity = 73/169 (43.20%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 LQ R E+R ++ R+ RPTR DKAR GYKAKQ K K QGVT++ ++ + VAEERA R LRVLNSY + +D K+ EVIL+DP H AI+ND ++W+C R RGLT AG++ RGL GKG K RPS R+ Sbjct: 24 LQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSK--RQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRS 190
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_THEAC (50S ribosomal protein L15e OS=Thermoplasma acidophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.579e-27 Identity = 73/177 (41.24%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 19 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 K+S++ +++ R E+R PSIVR+ PTR D+AR LG+K+K G +P +L ++S + +AEERA K + VLNSY++ ED YKYFEVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS R+ Sbjct: 18 KKSEIYDLVKK-RMIEWRHGPSIVRLEHPTRIDRARALGFKSKDGFIVVRSRVRRGGSNREKIMG--GRRPRRMAYNKLTRKKSLKLIAEERAADKYPNMEVLNSYYVGEDGLYKYFEVILVDRSHPNIFNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRS 191
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.579e-27 Identity = 73/175 (41.71%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 46 QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRS-------VAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 +R++ W R+ S+ R+ RPTR D+AR LGYKAKQ G+ + +P N+G K ++K S +AE RA RK L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+ + R RG TSAG+K RG+ +G K RPS RA Sbjct: 27 ERLQVW--RKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRG--------GLGHVRP-NRGRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRA 190
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_THEVO (50S ribosomal protein L15e OS=Thermoplasma volcanium GN=rpl15e PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27 Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 +++ R +R PS+VR+ PTR D+AR LGYK+K G +P +L ++S + +AEERA K L VLNSY++ ED YKY+EVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS RA Sbjct: 25 VEKSRMIGWRHGPSVVRLDHPTRIDRARALGYKSKDGFIVVRSRVRRGGSNREKIMG--GRRPRRLAYNKLTRKKSLKLIAEERAADKYPNLEVLNSYYVGEDGLYKYYEVILVDKSHPNIYNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRA 191
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27 Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 55 RCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 R E+R+ P++V++ RPTR D+AR LGYKAKQ K + G+ L + S + +AE RA RK + VLNSYW+ +D +K++E+ILVDP H +I +D ++W+ H+ R RGLTSAGKK RG R KG K PS +A +R Sbjct: 28 RLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKGKGTEKNYPSVQAHDRR 194
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_SULAC (50S ribosomal protein L15e OS=Sulfolobus acidocaldarius GN=rpl15e PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 73/180 (40.56%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 19 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHKARPSRR 546 + D R + R R E+R+ P+I R+ RPTR ++AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+EVI+VD +H IR+DP + WL + V++ R RGLTSAG+K RGL RG KG + K + ++ Sbjct: 14 QNKDWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGTVQRKWKKKQK 191
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26 Identity = 70/177 (39.55%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 22 QSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 +SDV L R++ W R+ S+ R+ RPTR D+AR LGYKAKQ + + + G +S + +AEERA + + VLNSYW+ +D KY+EVILVD H +I++D + WL NP H+ R RG TSAG+K RG+R +G K RPS R+ Sbjct: 18 KSDVKALLWDRMQVW--RREGSVTRIDRPTRIDRARALGYKAKQGIAVVRVHVRRGGRRAS--RYVRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVILVDGHHPSIQSDKNLAWLANPTHRGRAERGKTSAGRKGRGMRTRGRGTEKTRPSIRS 190
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26 Identity = 73/178 (41.01%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 19 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHL-HHKARPSRRA 549 K+SD+ +Q+ R +R+ S+VR+ PTR D+AR LGYKAKQ G +P +L ++S + +AEERA K + VLNSY++ ED YKY+EVIL+D + A+ +D ++W+ N +K R RGLTSAG K RGL G G L K+RPS RA Sbjct: 16 KKSDIYP-VQKARMVSWRKSGSVVRLDYPTRLDRARSLGYKAKQGFIIVRSRVRKGGQHRPKIMG--GRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGL-GHGRLGSAKSRPSIRA 189
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_NANEQ (50S ribosomal protein L15e OS=Nanoarchaeum equitans GN=rpl15e PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.573e-23 Identity = 67/173 (38.73%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 40 FLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 558 + QR++ W R+ P IV V RPTR D+AR LGYK KG G+ + + +AEERA R + VL SYW+ ED YK++EVILVDP + I N P WL + R RG TS+ +K+RGLR G K RPS+RA +K Sbjct: 22 YKQRIQQW--RREPPIVEVERPTRIDRARALGYKPLPGIKIVRVRVRKGTRKREEIKG---GRRPKAEYRIRPLGVNLQWIAEERANRLHRNMEVLGSYWVGEDGLYKWYEVILVDPFNPNIYNRPEYVWLLQKNQRGRVFRGKTSSARKFRGLRNGGLGAEKVRPSKRANFK 189
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METLZ (50S ribosomal protein L15e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl15e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21 Identity = 64/175 (36.57%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 22 QSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 540 +S V + L +R++ W R+ ++VR+ RPTR D+AR LGYKAKQ + G+ TN+ G+ + ++ +S+AEERA + + VLNSYW+ +D KY+EVILVD ++ D + W+ + + R RG TSAG++ RGL +G K RPS Sbjct: 18 ESGVKKLLWERMQTW--RRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRY---IRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADT--RGRVFRGKTSAGRRARGLHNRGTGTEKCRPS 185 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |