DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15_BRANA (60S ribosomal protein L15 (Fragment) OS=Brassica napus GN=RPL15 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.410e-19 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 34 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQ 150 MRF+QRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ Sbjct: 3 MRFVQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQ 41 HSP 2 Score: 36.5798 bits (83), Expect = 1.410e-19 Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = 2 Query: 206 PRALCMVNPQTRVLLN*SFSAARGLLQRS 292 P+ LCMVNPQTR LLN S A LL RS Sbjct: 60 PKVLCMVNPQTRELLNSSSRGATVLLLRS 88
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAE (50S ribosomal protein L15e OS=Pyrobaculum aerophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19 Identity = 62/155 (40.00%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 28 DVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLC-NPVHKHRELRGLTSAGKK 489 +V L R E+R+ P+IVRV RP R ++AR+LGYKAKQ +P GV + +S R VAEERA RK L VLNSYW+ +D Y+YFEVIL+D I+NDP + +C V + R +R L KK Sbjct: 19 EVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVVVRVRLMRGPFNRRRPDS--GRRPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTIKNDPLYSGICGREVPRRRIIRRLRERQKK 171 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |