DC900083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.405e-49 Identity = 99/158 (62.66%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 100 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 570 RPTRPDKARRLGYKAKQ KG YGKP + GV QLKF RS +SVAEERAGR G LRVLNSYW+ EDSTYK+FEVIL+DP H IR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 158
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.468e-43 Identity = 88/147 (59.86%), Postives = 98/147 (66.67%), Query Frame = 1 Query: 133 GYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 570 GYKAKQ KG YGKP + GV QLKF RS +SV EERAGR G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 146
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.969e-36 Identity = 84/181 (46.41%), Postives = 108/181 (59.67%), Query Frame = 1 Query: 19 KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 K+S V + L R ++R+ P++VR+ RPTR D+AR LGYK KQ K KP GV ++ +S + +AEERA RK + VLNSYW+ ED +K++EVILVDP H AI+ DP++NWLC H+ R RGLTSAGKK RGLR KG K RPS RA +R Sbjct: 15 KESYVRQLLWE-RLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRR 192
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.360e-35 Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V + L++ R ++R+ P +VRV RPTR D+AR LGY+AKQ KG KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAG+K RGLR KG K RPS RA Sbjct: 12 KSPKKSYVGQLLKK-RMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRA 188
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.389e-35 Identity = 82/180 (45.56%), Postives = 108/180 (60.00%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V L++ R ++R+ P +VR+ RPTR D+AR LGY+AKQ KG KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 12 KSPKKSYVGELLKK-RMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRA 188
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.389e-35 Identity = 79/173 (45.66%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 43 LQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 561 LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ K KP G+ ++ +S + +AEERA +K + VLNSYW+ +D K++EVILVDP +I+ND NWLC HK R RGLTSAGKK RGL KG KARPS RA K+ Sbjct: 22 LQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRANGKK 192
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.732e-35 Identity = 86/184 (46.74%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 16 KKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNN 567 +KQSDV+RFL RVRCWEYRQ I R +RP+RPDKARRLGYKAKQ KG +GKP NQG+ QLKFQRS RS AEER R+ GGLR+LNSYWI + + + L P+ P P L GK+ RGL G+G H K+ A WKR N Sbjct: 13 RKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITKTVSTSTLKSSLSTPSTRLSVVMPVSTGSATPYTSAENLAVSHPLGKQNRGL-GRGSKHTKS--PNHAFWKRTN 193
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 9.777e-35 Identity = 83/180 (46.11%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V + L++ R ++R+ PS+VR+ RPTR D+AR LGY+AKQ KG KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 12 KSPKKSYVGQLLKQ-RMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.178e-34 Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V + L++ R ++R+ P++VR+ RPTR D+AR LGY+AKQ KG KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 12 KSPKKSYVGQLLKQ-RMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188
BLAST of DC900083 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.852e-34 Identity = 82/180 (45.56%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 10 RGKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 549 + K+S V L++ R ++R+ P +VR+ RPTR D+AR LGY+AKQ KG KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 12 KSPKKSYVGELLKQ-RMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSIRA 188 The following BLAST results are available for this feature:
BLAST of DC900083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900083 ID=DC900083; Name=DC900083; organism=Citrus sinensis; type=EST; length=904bpback to top |