CN185888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19 Identity = 62/155 (40.00%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGD---KSQDEIDFEFLGK---DKTIVQTNYYTTGTGNR--EEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNE--GEGFPNKPMFLYASVWDAS 680 D S+ L D G+ + S++ + +G FSSLI+ P T+G+ Y S+ GD K DE+D EFLG QTN Y G+ NR EE + L FD S+ FH Y I W P I + +D +R R E +P KPM LYA++WDAS Sbjct: 58 DDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSN--GDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDAS 210
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19 Identity = 58/162 (35.80%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGA----RWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 719 ++ + LT D G +R+ + YG F ++ K +F Y +G K DEID EFLG D T VQ NYYT G G+ E IH LGFD S+GFH Y W + I W +DG V A N P+ P + + W+ +D W P+ G Sbjct: 73 ENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMFQVNMKPIKNPGVVSSFFTYTGPSDGTK-WDEIDIEFLGYDTTKVQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVYTAYDN----IPDTPGKIMMNAWNGIGVDD--WLRPFNG 227
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 58/158 (36.71%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 264 LTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARW 701 L D GA ++S +L+G FS ++ G+++G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD ++G+H Y + W LI +D +R + ++ G FP N+PM +Y+S+WDA ++K W Sbjct: 57 LILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNW 212
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 3 Query: 285 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHID 689 G +R+ + YG + +Q K + +F Y + D DEID E LGK+ T VQ NYYT G G E+++DLGFD SE +H Y W P+ I W +DG+ V RA ++ P P + + W +D Sbjct: 636 GGEFRTNNFYHYGYYECSMQAMKNDGVVSSFFTYTGPSD-DNPWDEIDIEILGKNTTQVQFNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDGREVYRATQD----IPKTPGKIMMNAWPGLTVD 765
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 267 TFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 719 ++ ++ G +R+ + F YG + ++ K +F Y + + DEID EFLGKD T VQ N+Y G G E +H+LGFD S+ FH Y +W PD I + +DGK V R RN P P + ++W +D+ W G Y G Sbjct: 87 SYPYKSG-EYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNP-WDEIDIEFLGKDTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRN----IPVTPGKIMMNLWPGIGVDE--WLGRYDG 229
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_BACLI (Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 297 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 719 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I +LGFD + +H Y W P+ I+W +DG++ A P P + ++W+ + +D+ W G Y G Sbjct: 94 RSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQLKHTATTQ----IPQTPGKIMMNLWNGAGVDE--WLGSYNG 227
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18 Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 249 SNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP-NKPMFLYASVWDASH 683 + + LT D G+ + S +L+G FS ++ GN++G + YLSS EGD DEID EF+G + ++ TN + G G +E L FD + FH Y I W P I + +D VR ++ + +P +KPM L+A++WD S+ Sbjct: 50 TQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGD-GHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSY 197
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18 Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 258 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 677 +T T D G+ ++S +L+G I+ GN++G YLSS ++ DEIDFEFLG ++ TN +T G GNRE L FD + FH Y + W P I +L+DG +R + NE G +P ++PM +Y+S+W+A Sbjct: 49 LTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSK--GETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 192
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18 Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 258 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDA 677 ++L+ D G+ ++S +L+G ++ GN++G YLSS + DEIDFEFLG D I+ TN +T G GNRE+ L FD + FH Y I W P I +L+D +R + E G P N+PM +Y+S+W+A Sbjct: 54 LSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQ--GPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNA 197
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 213 DYTPEACTH----CADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDA 677 +Y P +H + +++ L D GA ++S +L+G FS ++ G+++G+ YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD ++G+H Y + W I +D +R + ++ G FP N+PM +Y+S+WDA Sbjct: 35 NYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSS--NNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDA 197 The following BLAST results are available for this feature:
BLAST of CN185888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185888 ID=CN185888; Name=CN185888; organism=Citrus sinensis; type=EST; length=732bpback to top |