CN185888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18 Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 228 ACTHCADSNSIT-LTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDA 677 A HC + +T L D+ GA + S +++L+G S I+ +G+++G Y+SS + +E DFEFLG + IVQTN Y G GNRE+ +L FD + FH Y I W + +++D +R + E +G P ++ M +Y+S+W+A Sbjct: 38 AMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSS--DGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNA 192
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 65/187 (34.76%), Postives = 92/187 (49.20%), Query Frame = 3 Query: 198 KEIAIDYTPEACTHCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGE---GFPN-KPMFLYASVWDASH------IDKARWC-GPYV 716 K+ + ++P D S TL D GA + S FL+G I+ +G++ G Y+SS ++DEIDFEFLG I+QTN Y G NREE L FD ++ FH Y I W I +++D ++ R RN GE +P +PM + AS+W+ DK W GP+V Sbjct: 39 KDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSS--DQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVD-QIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFV 222
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_BREBE (Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 51/146 (34.93%), Postives = 72/146 (49.32%), Query Frame = 3 Query: 297 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQ-DEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVGCDAP 731 R+ + YG F ++ K + +F Y + D DEID EFLGKD T +Q NY+T G G E +DLGFD SE F+ Y +W D I W ++G+ V A N P P + ++W +D W G + G + P Sbjct: 100 RTNDFYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDGDPWDEIDIEFLGKDTTRIQFNYFTNGVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNGEAVHTATEN----IPQTPQKIMMNLWPGVGVD--GWTGVFDGDNTP 239
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 246 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSS-LEGDKSQDEIDFEFLGKDKT---IVQTNYYTTGTGNREEI-----HDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDAS 680 + + +TL D G+ ++S + G F + I+ G T+G++ ++YLS+ E DE+D EFLG +QTN + G+G+R I L FD ++ FH Y I W P+ I + +D +R R FP +PM++Y S+WDAS Sbjct: 55 EQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMWVYGSIWDAS 208
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: GUB_CLOTM (Beta-glucanase OS=Clostridium thermocellum GN=licB PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 267 TFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWDASHIDKARWCGPYVG 719 ++ ++ G +RS + F YG + ++ K +F Y + + DEID EFLGKD T Q N+Y G E +H+LGFD S+ FH Y +W PD I + +DGK V R RN P P + ++W +D+ W G Y G Sbjct: 87 SYPYKSG-EYRSKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNP-WDEIDIEFLGKDTTKAQFNWYKNEVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTRN----IPVTPGKIMMNLWPGKGVDE--WLGRYDG 229
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 258 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDK---TIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFPNKPMFLYASVWD 674 + L D G + S + G F I+ P GNT G+ YL+S G DEIDFEFLG + +QTN + G GNREE L F+ ++ +H Y + W P I + +D +R + G +P+KPM + AS+W+ Sbjct: 57 VDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGG--GHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYPSKPMQVEASLWN 196
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 264 LTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEG---EGFPNKPMFLYASVWDAS 680 LT D GA S ++ YG FS+ ++ P G SG+ YLS+ E KS DEID E LG +D +QTN Y G+ REE FD ++ FH+Y + W +L+D VR+ N G +P+KPM LY +VWD S Sbjct: 65 LTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFP-NRGAFTSAYPSKPMSLYVTVWDGS 211
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 258 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEG--FP-NKPMFLYASVWDA 677 +T T D G+ ++S +L+G ++ GN++G YLSS ++ DEIDFEFLG ++ TN +T G GNRE L FD + FH Y + W P I +L+DG +R + NE G +P ++PM +Y+S+W+A Sbjct: 48 LTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSK--GETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 191
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 252 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVR--RAERNEGEGFP-NKPMFLYASVWDASH------IDKARW 701 + + L D G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G GNRE+ +L FD S+ +H Y + W I + +D +R + ++ G FP N+PM +Y+S+W+A ++K W Sbjct: 52 SEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE--HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNW 211
BLAST of CN185888 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 258 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKT---IVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDGKVVRRAERNEGEGFP---NKPMFLYASVWDA 677 ++L+ D G+ ++S +L+G ++ GN++G YLSS EG + DEIDFEFLG + ++ TN + G GNRE+ L FD ++ FH Y + W P I +++D +R E G P N+PM +Y+S+W+A Sbjct: 49 LSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSS-EGP-THDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNA 192 The following BLAST results are available for this feature:
BLAST of CN185888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185888 ID=CN185888; Name=CN185888; organism=Citrus sinensis; type=EST; length=732bpback to top |