DC900077

Overview
NameDC900077
Unique NameDC900077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5636 contig Csv1_Contig5636:1..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.724e-22
Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 3
Query:  165 TTSEPKLCVNGCAFFGTAANMGLCSKCYRDLRVKED----QAASAKAAMEKSLNLKSP--KQIHQTPELETAKVAAEPFVGXXXXXXXXXXXXVEQPEPQAKGPTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            TT+   LC N C      A   +C KC+    V       ++ S      +S+NL+S   K + +  E++  K   +  V                         RC  C KKVGLTGF+C+CG  FC  HRY ++HDC++D+K  GR+AIAR NPVVKA K+ ++
Sbjct:   19 TTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVESGSILKRSARSVNLRSSPAKVVIRPREIDAVKKRDQQIVN------------------------RCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21
Identity = 58/159 (36.48%), Postives = 75/159 (47.17%), Query Frame = 3
Query:  168 TSEPKLCVNGCAFFGTAANMGLCSKCYRDLRVKEDQAASAKAAMEKSLNLKSPKQIHQTPELETAKVAAEPFVGXXXXXXXXXXXXVEQPEPQAKGPTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            T EP LC+ GC FF T+    LCSKCY D    E    SA+     ++N K+ +++       TA+                        E    G     +C KKVGL GF C+CG  F   HRYPE+H C  D+K    D +A+ NPVVK DKL R+
Sbjct:    2 TGEPSLCIRGCGFFSTSQTKNLCSKCYNDFLKDE----SARYLATFNVNTKAAEEV-------TAQ------------------------EATVLGSKGGCACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21
Identity = 57/154 (37.01%), Postives = 74/154 (48.05%), Query Frame = 3
Query:  183 LCVNGCAFFGTAANMGLCSKCYRDLRVKEDQAASAKAAMEKSLNLKSPKQIHQTPELETAKVAAEPFVGXXXXXXXXXXXXVEQPEPQAKGPTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            +C  GC FFG+AA  GLCSKCY+  + +        A      +LK         +L T  +     VG            +  P    K   RC +C KKVGL GF C+CG  FCG H       C FD+K  GR+AIAR NP+V A K+++I
Sbjct:   17 MCAAGCGFFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKV------VADLSTLVIKDNSGVGGEGTTV------MAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVAPKINKI 152          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.552e-20
Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  186 CVNGCAFFGTAANMGLCSKCYRDLRVKEDQAASAKAAMEKSLNLKSPKQIHQTPELETAKVAAEPFVGXXXXXXXXXXXXVEQPEPQAKGPTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDR 641
            C  GC  +GT  N  LCS CY+            K+ ++ S  L+   +  Q+   +       P V               + EP  K   RC  C +KVG+ GFKC+CG  FCG HRYPE+H C FD+K +GR A+A   P+++ADKL R
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYK------------KSVLQHSPALRFEPETEQS---QCCPPTNSPAV---------------EEEPVKK--RRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19
Identity = 61/206 (29.61%), Postives = 88/206 (42.72%), Query Frame = 3
Query:  168 TSEPKLCVNGCAFFGTAANMGLCSKCYRDLRVKEDQAA---------------------------------SAKAAMEKSLNLK----------SPKQIHQTPELETAKV-AAEPFVGXXXXXXXXXXXXV-EQPEPQAKGP--TRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            T  P LC  GC F+G     G+CS CY++   ++  +                                  +A +  EKS N+           +   I +  ++ T K   +EP V               E+  P+   P   RC  C KKVGLTGF C+CG+ FCG+HRY +KH+C +D+K      I + NPVV A+K+ RI
Sbjct:    8 TPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAGLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19
Identity = 61/206 (29.61%), Postives = 88/206 (42.72%), Query Frame = 3
Query:  168 TSEPKLCVNGCAFFGTAANMGLCSKCYRDLRVKEDQAA---------------------------------SAKAAMEKSLNLK----------SPKQIHQTPELETAKV-AAEPFVGXXXXXXXXXXXXV-EQPEPQAKGP--TRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            T  P LC  GC F+G     G+CS CY++   ++  +                                  +A +  EKS N+           +   I +  ++ T K   +EP V               E+  P+   P   RC  C KKVGLTGF C+CG+ FCG+HRY +KH+C +D+K      I + NPVV A+K+ RI
Sbjct:    8 TPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.584e-19
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 3
Query:  429 EQPEPQAKGPTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKL 635
            EQPE       RC +C +KVGLTGFKC+CG TFCG HRY ++H C FD+K +GR+ IA+ NPVV ADKL
Sbjct:  170 EQPEAN-----RCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.121e-18
Identity = 56/198 (28.28%), Postives = 87/198 (43.94%), Query Frame = 3
Query:  177 PKLCVNGCAFFGTAANMGLCSKCYRDLRVKEDQA---ASAKAAMEKSLNLKSPKQIHQ--TPELETA-----------------------------KVAAEPFVGXXXXXXXXXXXXVEQP-EPQAKG-------PTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            P LC  GC F+G     G+CS CY++   +++ +    S  A    SL+   P Q      PE ++A                               + +  V              +QP E Q+K          RC  C KKVGLTGF+C+CG+ +CG+HRY + H+C++++K    + I + NPVV  +K+ +I
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 53/198 (26.77%), Postives = 92/198 (46.46%), Query Frame = 3
Query:  177 PKLCVNGCAFFGTAANMGLCSKCYRDLRVKEDQA-------ASAKAAMEKSLNLK----SPKQIHQTPELETAKVAAEPF-----------------------VGXXXXXXXXXXXXVEQP-EPQAKG-------PTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            P LC  GC F+G     G+CS CY++   +++ +       A++ +++ +SL ++    S  +   T +  ++ +   P                        V              +QP E Q+K          RC  C KKVGLTGF+C+CG+ +CG+HRY + H+C++++K    + I + NPVV  +K+ +I
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DC900077 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.260e-18
Identity = 55/215 (25.58%), Postives = 91/215 (42.33%), Query Frame = 3
Query:  177 PKLCVNGCAFFGTAANMGLCSKCYRD---------------------------LRVKEDQAASAKAAMEKSLNLKSP------------------------KQIHQTPELETAKVAAEPFVGXXXXXXXXXXXXVEQP-EPQAKG-------PTRCLSCNKKVGLTGFKCKCGSTFCGIHRYPEKHDCTFDFKVTGRDAIARANPVVKADKLDRI 644
            P LC  GC F+G     G+CS CY++                           ++  +     A++A++ + +   P                        K + +T +L+  +  AE  V              +QP E Q+K          RC  C KKVGLTGF+C+CG+ +CG+HRY + H+C++++K    + I + NPVV  +K+ +I
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPR--AEGLVPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
The following BLAST results are available for this feature:
BLAST of DC900077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SAP5_ARATH3.724e-2234.34Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH4.117e-2136.48Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ORYSJ4.117e-2137.01Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP10_ARATH4.552e-2036.18Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE1.014e-1929.61AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN1.014e-1929.61AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP14_ORYSJ8.584e-1960.87Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN6_HUMAN1.121e-1828.28AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_PONAB3.262e-1826.77AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_RAT4.260e-1825.58AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionDC900077 VSS Citrus sinensis cDNA clone VS27Q83 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900077 ID=DC900077; Name=DC900077; organism=Citrus sinensis; type=EST; length=830bp
CCGAAACCAAAACCAGAACCAGCACCGCGGTTCTGCTCCTGCGCTTCCCA
TTTGAAACAGAAGAGATAGATCGCGGCGGGTCCTGCTGTAACAGAGTCCG
AGAAGATCCAAAACCCTAATTCGGAAAAAAGATGGGTTCAGAACAAAGCG
ATGGAACCAGCTACACCACATCTGAGCCAAAGCTCTGCGTCAACGGTTGT
GCCTTCTTCGGCACTGCGGCGAATATGGGCTTATGCTCAAAGTGTTACAG
GGATTTGCGGGTTAAGGAGGACCAAGCTGCCTCCGCAAAAGCCGCTATGG
AGAAATCTCTCAATTTGAAGTCACCGAAGCAAATCCATCAGACGCCAGAA
TTGGAGACTGCCAAGGTGGCTGCTGAGCCCTTTGTGGGTTCCTCGTTGTC
TGCTGCGGCCTCTCAACAGTTGAGTGTTGAGCAGCCTGAGCCCCAAGCCA
AGGGGCCTACCAGGTGCTTGAGTTGCAACAAGAAGGTCGGATTGACAGGG
TTCAAGTGTAAGTGCGGGAGTACTTTCTGTGGAATCCATCGGTACCCAGA
GAAGCATGATTGTACATTTGATTTTAAGGTTACTGGTCGTGACGCTATTG
CCAGAGCAAATCCTGTTGTCAAAGCTGATAAGCTGGACAGGATCTGAAAT
CAGAGTCTGGTAATTTGGAAAAANTTTGGTATGGTAATTGTGTCAGTTGG
GTTATTGTTGATTTAGCTTAGCTTTATTTCCTNCTGTTCTTGTTAGTGTT
GGTCAGGACTTGGGAGGGACTCGTAAATGTAGTTTCCTATCTGCATTGGA
TATACTCTATATAATGCGAAGAATCTTTCC
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