CN185879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 312 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 734 +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L MLVYVWSR P ++N +GL+T +A +LPWA++ L ++ G+ ++ D LGI GH+YYFL + P GK LL TP +++ L+ Sbjct: 70 SFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALTAMLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYFLEDVFPNQPGGKRLLLTPSFLKLLL 209
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.546e-24 Identity = 61/152 (40.13%), Postives = 88/152 (57.89%), Query Frame = -3 Query: 309 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIFRS-----YFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 737 ++F + +ARY LE+ F +TADFL+M++FGA L L+ IP + FL SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ D LG+IAGH YYFL ++P T + LKTP +++ L A Sbjct: 68 LDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGHAYYFLAEVYPRMTNRRPLKTPSFLKALFA 219
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.672e-24 Identity = 57/141 (40.43%), Postives = 89/141 (63.12%), Query Frame = -3 Query: 312 FGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 731 F +L + RY LE+G F R ADF++M +FG + + +L + +FLG +L+ MLVYVWSR P+ ++N +GL+ +A +LPWA++ ++ G+ +V D LGI+ GH+YYFL + P GK LL TP ++ L+ Sbjct: 71 FFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSL--FFLGQALMAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYFLEDVFPNQPGGKRLLLTPSVLKLLL 209
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.675e-24 Identity = 60/152 (39.47%), Postives = 87/152 (57.24%), Query Frame = -3 Query: 309 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 737 ++F + +ARY LE+ F +T DFL+M++FGA L L+ IP + FL SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ D LG+IAGH YYFL ++P T + LKTP +++ L A Sbjct: 68 LDFLFHMFFLARYCKLLEENSFRGKTTDFLYMLLFGATVLTGIVLIGGMIPYLSVSFSKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGHAYYFLAFVYPRMTDRRPLKTPSFLKALFA 219
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 63/173 (36.42%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 222 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 734 NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ D LGI GH+Y+FL + P G +LKTP + K + P N ER G A+ G RL Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 63/173 (36.42%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 222 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 734 NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ D LGI GH+Y+FL + P G +LKTP + K + P N ER G A+ G RL Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 222 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSY-FLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRL 734 NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG + MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ D LGI GH+Y+FL + P G +LKTP + + + P N ER G A+ G RL Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGF---LMTLFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDIFPNQPGGIRILKTPS-ILRTIFDTPDEDPNYNPLPEERPGGFAW-GEGQRL 237
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL1_DICDI (Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = -3 Query: 315 FGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVI-FGSPLVPDPLGIIAGHLYYFLTVLHPLATG-KNLLKTPKWVQKL 731 F L+ +Y LE + ++ D+L+ +IF ++ ++ I F YFLG + L+Y++SR P N YG + K YLPW L + G P D L I++GH++++LT ++P A G L+KTPK++ + Sbjct: 69 FLFNLIFFYQYTTRLESLNYAGKSDDYLFCIIFISICNIIFGLI--FEYYFLGTMTIMSLIYIYSRMNPTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSGHIFFYLTDIYPRANGVPALIKTPKFITNI 207
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL1_HUMAN (Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.266e-15 Identity = 50/179 (27.93%), Postives = 92/179 (51.40%), Query Frame = -3 Query: 216 IRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPL-ATGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTTGVAFR--GRSYRLSD 725 + L + +Y LE G F+ R AD+L+M++F + +++ + L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ + +G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++ G G+ +RL D Sbjct: 74 VNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD 250
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL1_BOVIN (Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.266e-15 Identity = 50/179 (27.93%), Postives = 92/179 (51.40%), Query Frame = -3 Query: 216 IRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPL-ATGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTTGVAFR--GRSYRLSD 725 + L + +Y LE G F+ R AD+L+M++F + +++ + L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ + +G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++ G G+ +RL D Sbjct: 74 VNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD 250 The following BLAST results are available for this feature:
BLAST of CN185879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185879 ID=CN185879; Name=CN185879; organism=Citrus sinensis; type=EST; length=748bpback to top |