CN185878

Overview
NameCN185878
Unique NameCN185878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:12..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.015e-26
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            FE +  ++ K Y +  EK+ R+ IF+ N+  I++ NS N +    +NRFAD+   E    + G   G     L    +           P S DWR    +  VKDQG CG+CW F+++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DY Y
Sbjct:   40 FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASG--ELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCD-FVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSY 214          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.026e-25
Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2
Query:  473 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I +NGG+D+EE YPY
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPY 91          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.750e-25
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  233 GKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR--SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            GK Y+   E   R  IF+ N    +  N +      +Y   LN  ADLT+EE+  +  G R    +T L+ KR  S+ Y     E LPD VDWR KGAV  V++QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YPY
Sbjct:   99 GKHYDQK-ENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFM-VRNGLRL-PNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYPY 271          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W   + K + A+ E  +R  IF  N R + E+N +  T+K+ ++  FA +TNEEY S+    R G ++  +      RYL       P +VDWRKKG V  ++DQG+CGSC+ F +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++N GI  E DYPY
Sbjct:   16 FNTWVANNNKHFTAV-ESLRRRAIFNMNARIVAENNRKE-TFKLSVDGPFAAMTNEEYNSLLKLKRSGEEKGEV------RYL---NIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYPY 186          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 71/186 (38.17%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W  K+ K + A+ EK +R  IF  N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +V C   + N GCNGGL    +++II++ G+  E DYPY
Sbjct:   16 FNTWASKNNKHFTAI-EKLRRRAIFNMNAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPY 186          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24
Identity = 71/186 (38.17%), Postives = 103/186 (55.38%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W   + K + A+ E  +R  IF  N RF+ E N +  ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWR +G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ LV C   + N GCNGGL    +++II N G+  E DYPY
Sbjct:    9 FNTWAANNNKHFTAV-EALRRRAIFNMNARFVAEFNKKG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTVEENGKVTYLNIQAPESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQN-GVAKESDYPY 179          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNR-FADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F  W  K+ K + A+ EK +R  IF  N +F+D  N    ++K+ ++  FA +TNEEYR++            LKSKR+     +V       P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +     + N GCNGGL    +++II++ G+  E DYPY
Sbjct:   12 FNTWASKNNKHFTAI-EKLRRRAIFNMNAKFVDSFNKIG-SFKLSVDGPFAAMTNEEYRTL------------LKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEH-GVAKESDYPY 181          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.811e-22
Identity = 62/187 (33.16%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  227 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMY---------LGARFGAKRTSLKSKRSDRYLPRVGEA-----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGI-NKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            K+ ++Y  + E+ ++++ FK N   I +HN  N+ YK+ +N+F+D + +++ S +         L  ++    +S+ + +    +     A     +P+ +D+R+KG V E KDQG CGSCWAF+++  VE +  K    ++++LSEQE+VDC +  N GC+GG   Y+F + I+N GI   +DY Y
Sbjct:  243 KYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIYAIEN-GICMGDDYKY 427          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.089e-22
Identity = 68/186 (36.56%), Postives = 101/186 (54.30%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPD-------SVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            FE W +K+ K Y    EK  R EI+  N R I+EHN  E+ TY++G N+F  L++EE+  +YL             ++SD  +  +G +LP+       +VDWR       VK+QG C S WAFS   ++E    I     I+ S Q++VDCD + N GC+GG   YA E+++   G+ +  +YPY
Sbjct:   29 FERWALKNNKFYTE-SEKLYRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYL-------------QKSDSSVNIMGASLPEVQLEGLGAVDWRN---YTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN-NTGCSGGYNAYAMEYVL-RVGLVSSTNYPY 195          
BLAST of CN185878 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.034e-22
Identity = 65/199 (32.66%), Postives = 108/199 (54.27%), Query Frame = 2
Query:  209 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLK--------SKRSDRYLPRVGEA------------LPDSVDWRKKGAVAEVKDQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 742
            F+A+  K+ K + +  ++ +RF  F+ N   +  H      Y + LN+F+DL++EE++++Y         TSL         S ++  Y+ ++ +A              ++++W +  AV+ +KDQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+ I + G+  E + PY
Sbjct:  120 FDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKP-TEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEY-IHSKGVSFESEVPY 315          
The following BLAST results are available for this feature:
BLAST of CN185878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CATV_NPVSE6.015e-2637.08Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATL1_SHEEP1.026e-2561.54Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL_BRUPA1.750e-2542.37Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CPP1_ENTHI3.899e-2539.34Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP2_ENTHI6.650e-2538.17Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CPP3_ENTHI4.310e-2438.17Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
ACP2_ENTHI9.602e-2437.30Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP_PLAVS1.811e-2233.16Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATL3_PARTE3.089e-2236.56Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CYSP_THEAN4.034e-2232.66Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185878 ID=CN185878; Name=CN185878; organism=Citrus sinensis; type=EST; length=742bp
GCGTTATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTT
CTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTAC
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