CN185869

Overview
NameCN185869
Unique NameCN185869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1162 contig Csv1_Contig1162:70..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 40/131 (30.53%), Postives = 63/131 (48.09%), Query Frame = -1
Query:  383 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNE 775
            +PLDS V+T+ K  GG   N+I +   + GT R  S ES  ++K RIE ++ G  A  +C   +D+       +    N+ +L + F        D   V      M  EDF +    +PG+ F+LG+ +E
Sbjct:  218 NPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIESIVAGIEASFQCEVIIDY----GAMYHQVYNHEELTREFMEFVHKQTD-MNVITCTEAMTGEDFGYMLREIPGFMFWLGVNSE 343          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: Y1352_STAS1 (Uncharacterized hydrolase SSP1352 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1352 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 39/149 (26.17%), Postives = 71/149 (47.65%), Query Frame = -1
Query:  323 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 769
            L   +V +  F+ G A N +P +  + GT R +  +    +KQ++ ++      +      V F    +  +PPT N+  L K+ +    +  + + +    P +  EDFSFY ++ P YF F+G+++E  G V   H+ +   NE  L
Sbjct:  222 LKRNIVHMGHFEAGEAINTVPSNGYLEGTIRTYDVKDLEIVKQQMTKISESVKLLFNVECEVKF----EEGYPPTFNDPQLRKHVENGLVNA-EFEVIDKPTPYLFGEDFSFYSQIAPSYFVFVGVRDEAKGYVTGLHTSHLNFNESIL 365          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = -1
Query:  314 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDALPYG 775
            DPLDS V+T+ K  GG   NVI +   + GT R  S +S  ++K+RIE ++ G     +C A +D+ S     +    N+ +L   F   A +    + ++    + G EDF +    +PG+ F+LG+ +         H    T NE A+  G
Sbjct:  219 DPLDSAVITIGKISGGTVQNVIAEHARLEGTIRTLSVDSMKKVKERIEAMVSGIKMAYQCEAEIDYGS----MYHQVYNDPELTTEFIQFAENYQGIRFIRCKEAMTG-EDFGYMLAEIPGFMFWLGVDSP-----YGLHHAKLTPNEAAIDQG 362          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni GN=hipO PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11
Identity = 47/167 (28.14%), Postives = 81/167 (48.50%), Query Frame = -1
Query:  278 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKV-MAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDALPYGAALHASLALRYL 775
            DP +S VV++  F  G AFN+IPD   I  + RA   E+    +++I ++  G A        ++    +    P T+NN++   +   VA ++   +  +    P+M SEDF F+ E+    + FL  +N+        H+  +  N+  L   A+ +A LAL+YL
Sbjct:  225 DPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICKGIAQAN----DIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFGFFCEMKKCAYAFLENENDIY-----LHNSSYVFNDKLLARAASYYAKLALKYL 382          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11
Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = -1
Query:  323 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 775
            DPLDS V+TV    GG A N+I +   + GT R  S+ES   +K+RIEE++ G     RC   V + S     +    N + L + F     D      V+     M  EDF +  +  PG+ F+LG  +         H      +EDA+
Sbjct:  218 DPLDSAVITVGTITGGTAQNIIAEHAHLEGTIRTLSEESMRMVKKRIEELVKGIEIGFRCKGKVTYPS----VYHQVYNTSGLTEEFMQFVSDH-QLADVRTAKEAMTGEDFGYMLKKYPGFMFWLGADSS-----HGLHHAKLNPDEDAM 358          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: Y1410_STAAR (Uncharacterized hydrolase SAR1410 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1410 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 45/150 (30.00%), Postives = 69/150 (46.00%), Query Frame = -1
Query:  323 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFY-QEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 769
            L   +V +  F+ G A N +P +  + GT R +  +  T +K ++ ++    A   +    VD   K    +PPTIN+  L    +  A    D        P +  EDFSFY Q++ P YF F+G +NE  G V   H+ Y   +E  L
Sbjct:  222 LKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMHKI----AESVKLLFNVDCEVKFAEGYPPTINSPKLRTQIED-ALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSYLNFDEKVL 366          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: Y1398_STAAM (Uncharacterized hydrolase SAV1398 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1398 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 43/150 (28.67%), Postives = 68/150 (45.33%), Query Frame = -1
Query:  323 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFY-QEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 769
            L   +V +  F+ G A N +P +  + GT R +  +  T +K ++ ++      +      V F       +PPTIN+  L    +  A    D        P +  EDFSFY Q++ P YF F+G +NE  G V   H+ +   +E AL
Sbjct:  222 LKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVECEVKFAEG----YPPTINSPKLRTQIED-ALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLNFDEKAL 366          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: Y1253_STAAB (Uncharacterized hydrolase SAB1253 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1253 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 44/150 (29.33%), Postives = 70/150 (46.67%), Query Frame = -1
Query:  323 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFY-QEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 769
            L   +V +  F+ G A N +P +  + GT R +  +  T +K +++++    A   +    VD   K    +PPTIN+  L    +  A    D        P +  EDFSFY Q++ P YF F+G +NE  G V   H+ +   +E  L
Sbjct:  222 LKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMQKI----AESVKLLFNVDCEVKFAEGYPPTINSPKLRTQIED-ALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLNFDEKVL 366          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: Y1230_STAAN (Uncharacterized hydrolase SA1230 OS=Staphylococcus aureus (strain N315) GN=SA1230 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 43/150 (28.67%), Postives = 68/150 (45.33%), Query Frame = -1
Query:  323 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFY-QEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDAL 769
            L   +V +  F+ G A N +P +  + GT R +  +  T +K ++ ++      +      V F       +PPTIN+  L    +  A    D        P +  EDFSFY Q++ P YF F+G +NE  G V   H+ +   +E AL
Sbjct:  222 LKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLLFNVECEVKFAEG----YPPTINSPKLRTQIED-ALIKADLNVYDKPTPFLFGEDFSFYGQQLAPAYFVFIGTRNEDKGFVTGLHTSHLNFDEKAL 366          
BLAST of CN185869 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 44/154 (28.57%), Postives = 69/154 (44.81%), Query Frame = -1
Query:  314 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVESTHSPYFTLNEDALPYG 775
            +P++  V+T+ K   G   NVI D  +I GT R  +++    ++QR++++  G A    C   V+    +  + P   +    H+  Q +  D     K K   P M  EDF F     PG  F+LG     +G   S HS  F  +E A+  G
Sbjct:  224 NPIEGGVLTLGKVSAGNVRNVIADQAVIEGTIRGLTQKMILLIQQRVQQICEGTAQAFNCQ--VEVKMNQGGYLPVENDPTLTHELIQFMQSD--SAIKFKKTPPAMTGEDFGFLLSKFPGTMFWLG-----VGATSSLHSATFNPDERAIQLG 368          
The following BLAST results are available for this feature:
BLAST of CN185869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
DAPL_BACCR4.109e-1230.53Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
Y1352_STAS15.366e-1226.17Uncharacterized hydrolase SSP1352 OS=Staphylococcu... [more]
DAPL_GEOSW7.009e-1229.87Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
HIPO_CAMJE1.196e-1128.14Hippurate hydrolase OS=Campylobacter jejuni GN=hip... [more]
DAPL_BACA21.561e-1131.13Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
Y1410_STAAR2.663e-1130.00Uncharacterized hydrolase SAR1410 OS=Staphylococcu... [more]
Y1398_STAAM5.933e-1128.67Uncharacterized hydrolase SAV1398 OS=Staphylococcu... [more]
Y1253_STAAB5.933e-1129.33Uncharacterized hydrolase SAB1253 OS=Staphylococcu... [more]
Y1230_STAAN5.933e-1128.67Uncharacterized hydrolase SA1230 OS=Staphylococcus... [more]
DAPL_PEDPA7.749e-1128.57Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185869 ID=CN185869; Name=CN185869; organism=Citrus sinensis; type=EST; length=781bp
TTTTTTTTTTTTTTTTTCCGATAGAAATGTTATTCGCAATGCCTCAATTA
TTTCCAAAATTATTTTGTCTTGATACATTGACGAATGTTAACTTATTTCC
CACCTAACTGAAAATCAATAAGATGTTCTTCCTTGAATCAAACTTGTATA
ACAGGACATTCTGGTAACATTTACACCAGTACTGGATTCCATAGTCATTG
ATAAGCAAGTCAACAGTACCTTACAGTTCATCGCGGTAGTTTCCCTCTGG
CAAAGAAATTTCTGGTCCAAACTCAAGAAGATACCTTAAAGCAAGTGATG
CATGAAGTGCGGCTCCATAAGGAAGTGCATCTTCATTGAGTGTGAAGTAG
GGGGAGTGTGTAGATTCAACCTTCCCAAGTGTCTCATTCTTCATCCCTAG
GAAGAAGAAGTATCCAGGCATTACTTCTTGGTAAAATGAGAAATCTTCAG
ATCCCATCACTGGTGCCATAACCTTAACTTTTTGAGTATCAAGCATATCT
CCAGCAACAGTTTGGAAGTACTTGTGCAAATCGTTATTGTTTATGGTGGG
AGGGAAAAAGGGTTTCTCTTTTGACAGGAAATCAACAGTTGCACTGCATC
TCTGTACTGCAGCTTGCCCAATGATAACCTCCTCAATACGTTGCTTTAGT
TGCGTGAAGCTTTCCTTTGAAAAGGCCCGGAAAGTGCCTCCAATTAATAC
TGAATCTGGAATGACATTGAATGCACCACCTCCTTGAAATTTTGCAACTG
TCACGACCTGTGAATCAAGTGGATCAGCTTC
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