DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  614 PLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 78/148 (52.70%), Postives = 98/148 (66.22%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PL++ +   Y++WAV SFR+    V + TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + +    E   Y  GIG GVYDIHSPR+PS EE+   + + L V      W+NPDCGLKTR+  EV PAL +MV AAK  RT L
Sbjct:  612 PLKEKDWDSYIEWAVQSFRLATASVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIHTL-EQTTYEKGIGLGVYDIHSPRVPSKEEMYTIVEQSLKVCNPKYFWINPDCGLKTRRTEEVLPALEHMVEAAKEARTLL 758          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.033e-37
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EAFEYPNEIGPGVYDIHSPNVPSVEWIEALLAKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.655e-37
Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PL +S+   YL WAV +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E +   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLHRSDWDAYLAWAVDAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPSVEWMEALLKKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVQAAQRLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.467e-37
Identity = 81/145 (55.86%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+S+   YL W V +FRI     ++ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLRRSDWDAYLQWGVEAFRINAAVAKNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLAKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.528e-37
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV ++E +RS  ++L      V +   +GPGVYDIHSPR+PST EIA+ +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA  +R
Sbjct:  610 PLRRADQEEYLRWAVGAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSLEAARSHMEVLDDLN-AVGFSNSVGPGVYDIHSPRVPSTAEIAESLRAALRAVPAERLWVNPDCGLKTRNPDEVSASLKNMVAAAHEVR 753          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_MYCPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium paratuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.914e-37
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV ++E +RS  ++L      V +   +GPGVYDIHSPR+PST EIA+ +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA  +R
Sbjct:  610 PLRRADQDEYLRWAVGAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSLEAARSHMEVLDDLN-AVGFSNSVGPGVYDIHSPRVPSTAEIAESLRAALRAVPAERLWVNPDCGLKTRNPDEVSASLKNMVAAAHEVR 753          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.914e-37
Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  614 PLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_SYNJB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Synechococcus sp. GN=metE PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.009e-36
Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEK-LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PL+K     YL WAV +FR+   G +  TQIHTHMCYS F DII  I  +DADV++IENSRS+ K LL + + G ++   +G GVYD+HSP +PS E+I  ++   LA L     WVNPDCGLKTR++ EV PAL NMVAAA  L  +L
Sbjct:  598 PLKKERWPEYLSWAVDAFRLATGGAKPETQIHTHMCYSEFGDIIEHIERLDADVLSIENSRSNNKTLLQIAQAGYRHQ--VGNGVYDVHSPAVPSVEQILQQLRTGLAHLPVEQTWVNPDCGLKTRRWEEVIPALKNMVAAAHQLGEEL 744          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.009e-36
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYG--AGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 453
            PLR ++H  YL WA  +FR+T  GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS    + V  E   +G     GPGVYDIHSPR+PS EE A  +   L  +    LWVNPDCGLKTR + E + +L N+VA A+ LR +L+++
Sbjct:  623 PLRAADHTAYLAWATEAFRLTTSGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARSH---MQVAHELATHGYPREAGPGVYDIHSPRVPSAEEAAALLRTGLKAIPAERLWVNPDCGLKTRGWPETRASLENLVATARTLRGELSAS 772          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_LISMC1.556e-3752.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN1.556e-3752.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP32.033e-3755.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWCT2.655e-3755.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT383.467e-3755.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA14.528e-3751.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCPA5.914e-3751.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO5.914e-3751.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SYNJB1.009e-3653.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO1.009e-3649.675-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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