DC900065

Overview
NameDC900065
Unique NameDC900065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:380..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.009e-36
Identity = 76/145 (52.41%), Postives = 102/145 (70.34%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PLR++ HA YLD AV +FR+ + GV+D TQIHTHMCY +F+DII  +  +DADVI++E SRS  +LL VF     Y   +GPGVYDIHSPR+PS +E+   +     VL  + LW NPDCGLKTR + E + +L+++VAAA  +R
Sbjct:  634 PLRRAAHAAYLDAAVGAFRLASSGVRDATQIHTHMCYCDFHDIIDHVAALDADVISLEASRSRMELLDVFATHA-YPNEVGPGVYDIHSPRVPSIDEMETLLRAASRVLPLDRLWANPDCGLKTRDWPETRASLAHLVAAATRVR 777          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus mutans GN=metE PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.318e-36
Identity = 80/150 (53.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            PLRKS+   YLD AVH+F I    V+D TQIHTHMCYS F++II +I  +DADVI+IE SRS   ++  F   V Y  GIG GVYDIHSPR+P+ EE+   I + L  L     WVNPDCGLKTR+  E   AL  +VAA K +R +L +
Sbjct:  597 PLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGDIIESFETAV-YPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEVRQKLGN 745          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.318e-36
Identity = 78/150 (52.00%), Postives = 98/150 (65.33%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            PL +SE   YL WA   FR++ C  +D TQIHTHMCYS FNDII +I D+DADVI+IE SRS  +LL  F +   Y   IGPGVYDIHSPR+P+  E+   +      L +  +WVNPDCGLKTR + E + AL  MV AA+ LR  + +
Sbjct:  615 PLHRSEWDTYLRWACECFRLSVCVARDETQIHTHMCYSEFNDIIEAIADLDADVISIETSRSRMELLDAFVD-FSYPNDIGPGVYDIHSPRVPARGEMLSLLRLAAERLPSERIWVNPDCGLKTRGWPETEAALVEMVEAARELRNAIGA 763          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.721e-36
Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 441
            PL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTR+  E   AL +M+ A K +R +
Sbjct:  614 PLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRQEPETIAALQDMIKATKEVRAE 759          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.935e-36
Identity = 73/148 (49.32%), Postives = 100/148 (67.57%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PLR++E   Y  WAV +FR++     D  QIHTHMCYS FN++I SIID+DADV TIE +RSD ++L+  +    +  G+GPGV+DIHSPR+P   E++  ++  L  ++   LWVNPDCGLKTR + E   +L  +VAAA+  RT L
Sbjct:  600 PLRRAEQDAYTRWAVGAFRLSTSTAPDHVQIHTHMCYSEFNELIRSIIDLDADVTTIEAARSDMQVLAALKSS-GFHLGVGPGVWDIHSPRVPELAEVSQLLSSALESVDPRRLWVNPDCGLKTRGWEETTASLKVLVAAAEQARTDL 746          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.834e-36
Identity = 78/145 (53.79%), Postives = 95/145 (65.52%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 435
            PL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +P    I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  608 PLKRSDWDAYLAWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPDVAWIEALLKKAAQRIPQERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.539e-36
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            PLR  +   YL W+V SFR+   G  D  QIHTHMCYS FN++I S+I +DADV TIE +RSD ++L+  +    +  G+GPGV+DIHSPR+PS +E+   +   L  ++   LWVNPDCGLKTR + EV+ +L  +V +AK  R ++ +
Sbjct:  595 PLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSVIALDADVTTIEAARSDMQVLAALKSS-GFELGVGPGVWDIHSPRVPSAQEVDGLLEAALQSVDPRQLWVNPDCGLKTRGWPEVEASLKVLVESAKQAREKIGA 743          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.539e-36
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 450
            PLR  +   YL W+V SFR+   G  D  QIHTHMCYS FN++I S+I +DADV TIE +RSD ++L+  +    +  G+GPGV+DIHSPR+PS +E+   +   L  ++   LWVNPDCGLKTR + EV+ +L  +V +AK  R ++ +
Sbjct:  595 PLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSVIALDADVTTIEAARSDMQVLAALKSS-GFELGVGPGVWDIHSPRVPSAQEVDGLLEAALQSVDPRQLWVNPDCGLKTRGWPEVEASLKVLVESAKQAREKIGA 743          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.539e-36
Identity = 74/148 (50.00%), Postives = 99/148 (66.89%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 444
            PL++ +   Y+ WAV SF +    V++ TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + ++  +    Y  GIG GVYDIHSPR+PS +E+   + + L V +    W+NPDCGLKTR+  EV PAL +MV AAK  R+ L
Sbjct:  612 PLKEKDWDAYITWAVQSFLLATSSVENETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFINTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMFTIVEQSLQVCDPKYFWINPDCGLKTRRTEEVIPALEHMVQAAKDARSLL 758          
BLAST of DC900065 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36
Identity = 73/151 (48.34%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    1 PLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 453
            PLR ++   YL WA  +FR+T  GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS  ++     E   Y    GPGVYDIHSPR+P  +E A  + K L  +    LWVNPDCGLKTR + E + +L N+VAAA+ +R + A +
Sbjct:  623 PLRAADRPAYLAWATEAFRLTTGGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARSHMQVARELAEHA-YPREAGPGVYDIHSPRVPGVDETAALLRKGLEAIPAERLWVNPDCGLKTRGWPETRASLENLVAAARTVRAEHAGS 772          
The following BLAST results are available for this feature:
BLAST of DC900065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_DESVM1.009e-3652.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRMU1.318e-3653.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL11.318e-3652.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW61.721e-3651.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF2.935e-3649.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS83.834e-3653.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL6.539e-3647.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB6.539e-3647.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK6.539e-3650.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW8.540e-3648.345-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionDC900065 VSS Citrus sinensis cDNA clone VS27Q70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900065 ID=DC900065; Name=DC900065; organism=Citrus sinensis; type=EST; length=646bp
CCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTC
CTTCAGAATCACCAACTGTGGCGTCCAGGACACTACCCAGATCCACACCC
ACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATG
GATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCT
GTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTG
TGTATGACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGAC
AGAATCAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAA
CCCTGACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCC
TCTCAAACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGT
GCCAAGTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGAT
TTTTTTTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTCTTATTACC
TATTCGAATAACTGTGGGTCGGGATGTGATGAAAATTTTCCGTATGCATA
TTATGCACTATTGAGCAATTGGCTTCTATTTTTCTTTGCTTGTAAA
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