DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DC900064_ssr40 microsatellite DC900064_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_RAT (Adenylate kinase isoenzyme 1 OS=Rattus norvegicus GN=Ak1 PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 1.493e-31
Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM--EESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            +GGPGSGKGTQC  IV+ +GYTHLS GDLLRAE+ SGS  G M+ +++++G++VP E  + +L+ AM  +   ++ FLIDG+PR  +    FE     +P  +L+ D   E M +R+L R +  GR DDN ETI++
Sbjct:   14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSSRGKMLSSIMEKGELVPLETVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFERKI-AQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKK 148          

HSP 2 Score: 33.4982 bits (75), Expect = 1.493e-31
Identity = 14/39 (35.90%), Postives = 25/39 (64.10%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            KR + + +++ PV+ +Y+ +G VRK++A   V  VF  V
Sbjct:  148 KRLETYYKATEPVISFYDKRGIVRKVNAEGSVDTVFSQV 186          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_PIG (Adenylate kinase isoenzyme 1 OS=Sus scrofa GN=AK1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.493e-31
Identity = 65/137 (47.45%), Postives = 91/137 (66.42%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM--EESGNDKFLIDGFPRNEENRAAFEAVTKI-EPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            +GGPGSGKGTQC  IV+ +GYTHLS GDLLRAE+ SGS  G M+  ++++G++VP E  + +L+ AM  +   +  FLIDG+PR  +    FE   KI +P  +L+ D   E M +R+L R +  GR DDN ETI++
Sbjct:   14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFE--RKIGQPTLLLYVDAGPETMTKRLLKRGETSGRVDDNEETIKK 148          

HSP 2 Score: 35.4242 bits (80), Expect = 1.493e-31
Identity = 15/39 (38.46%), Postives = 26/39 (66.67%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            KR + + +++ PV+ +YE +G VRK++A   V +VF  V
Sbjct:  148 KRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDDVFSQV 186          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KCY_MOUSE (UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.904e-31
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIREAV*GFLRI*SP 620
            LGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IKEGKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ + +  +L    P
Sbjct:    9 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLESTKP 161          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_BOVIN (Adenylate kinase isoenzyme 1 OS=Bos taurus GN=AK1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.532e-31
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM--EESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            +GGPGSGKGTQC  IV+ +GYTHLS GDLLRAE+ SGS  G M+  ++++G++VP E  + +L+ AM  +   +  FLIDG+PR  +    FE     +P  +L+ D   E M +R+L R +  GR DDN ETI++
Sbjct:   14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVQQGEEFER-RIAQPTLLLYVDAGPETMTKRLLKRGETSGRVDDNEETIKK 148          

HSP 2 Score: 34.6538 bits (78), Expect = 2.532e-31
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            KR + + +++ PV+ +YE +G VRK++A   V  VF  V
Sbjct:  148 KRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQV 186          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: UMPK_SCHPO (Probable uridylate kinase OS=Schizosaccharomyces pombe GN=SPCC1795.05c PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.533e-31
Identity = 67/139 (48.20%), Postives = 93/139 (66.91%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFG-YTHLSAGDLLRAEI-KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE---SGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            LGGPG+GKGTQC  + E F  + H+SAGD LR E  + GS+ G +I+  IK+GKIVP E+TI LL+  M+E    G DKFLIDGFPR  +    FE  +    +F L+F C +E M +R+++R +  GR DDN+E+I++
Sbjct:    8 LGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIVPMEITISLLETKMKECHDKGIDKFLIDGFPREMDQCEGFEK-SVCPAKFALYFRCGQETMLKRLIHRGKTSGRSDDNIESIKK 145          

HSP 2 Score: 34.2686 bits (77), Expect = 2.533e-31
Identity = 17/48 (35.42%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  571 LRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAV 711
            +  + KRF  + ++S+PVV+Y +++ ++  IDA +    VF D VKA+
Sbjct:  140 IESIKKRFVTYTKASMPVVEYLKSQNRLITIDAEQDPDAVFEDTVKAL 187          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KCY_RAT (UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.248e-31
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIREAV*GFLRI*SP 620
            LGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IKEGKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ + +  +L    P
Sbjct:    9 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNRESLEKRIQTYLESTKP 161          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KCY_PIG (UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.248e-31
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIREAV*GFLRI*SP 620
            LGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IK+GKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ + +  +L+   P
Sbjct:    9 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKP 161          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KCY_BOVIN (UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.248e-31
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIREAV*GFLRI*SP 620
            LGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IK+GKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ + +  +L+   P
Sbjct:    9 LGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKP 161          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_RABIT (Adenylate kinase isoenzyme 1 OS=Oryctolagus cuniculus GN=AK1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.591e-31
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            +GGPGSGKGTQC  IV  +GYTHLS GDLLRAE+ SGS  G  +  ++++G++VP E  + +L+ AM    +    FLIDG+PR  +    FE     +P  +L+ D   E M++R+L R +  GR DDN ETI++
Sbjct:   14 VGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKADTSKGFLIDGYPRQVQQGEEFER-RIAQPTLLLYVDAGPETMQKRLLKRGETSGRVDDNEETIKK 148          

HSP 2 Score: 34.6538 bits (78), Expect = 5.591e-31
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            KR + + +++ PV+ +YE +G VRK++A   V  VF  V
Sbjct:  148 KRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQV 186          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_MOUSE (Adenylate kinase isoenzyme 1 OS=Mus musculus GN=Ak1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.235e-30
Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM--EESGNDKFLIDGFPRNEENRAAFEAVTKI-EPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            +GGPGSGKGTQC  IV+ +GYTHLS GDLLRAE+ SGSE G  +  ++++G++VP +  + +L+ AM  +   ++ FLIDG+PR  +    FE   KI +P  +L+ D   E M +R+L R +  GR DDN ETI++
Sbjct:   14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFE--QKIGQPTLLLYVDAGAETMTQRLLKRGETSGRVDDNEETIKK 148          

HSP 2 Score: 33.113 bits (74), Expect = 1.235e-30
Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            KR + +  ++ PV+ +Y+ +G VRK++A   V  VF  V
Sbjct:  148 KRLETYYNATEPVISFYDKRGIVRKVNAEGTVDTVFSEV 186          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_RAT1.493e-3146.32Adenylate kinase isoenzyme 1 OS=Rattus norvegicus ... [more]
KAD1_PIG1.493e-3147.45Adenylate kinase isoenzyme 1 OS=Sus scrofa GN=AK1 ... [more]
KCY_MOUSE1.904e-3149.67UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1[more]
KAD1_BOVIN2.532e-3146.32Adenylate kinase isoenzyme 1 OS=Bos taurus GN=AK1 ... [more]
UMPK_SCHPO2.533e-3148.20Probable uridylate kinase OS=Schizosaccharomyces p... [more]
KCY_RAT3.248e-3149.67UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 ... [more]
KCY_PIG3.248e-3149.02UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1[more]
KCY_BOVIN3.248e-3149.02UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2[more]
KAD1_RABIT5.591e-3145.59Adenylate kinase isoenzyme 1 OS=Oryctolagus cunicu... [more]
KAD1_MOUSE1.235e-3046.72Adenylate kinase isoenzyme 1 OS=Mus musculus GN=Ak... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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