DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRP4 (Adenylate kinase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=adk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.971e-17
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E V+  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGVINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 2.971e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_MYCA9 (Adenylate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=adk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.486e-17
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIR 584
            LG PG+GKGTQ   I E FG   +S GDL R+ I  G+E G   +  +  G +VPSEVT K+++  ++E      F++DGFPR  +     AA E    +  + VL F    EE+ +R+L R  GR DD  + IR
Sbjct:    6 LGPPGAGKGTQAQLISEKFGIPQISTGDLFRSNISEGTELGLQAKQYLDAGDLVPSEVTNKMVEARLDEPDAAAGFILDGFPRTVDQADALAAMEEARGVTIDAVLEFRVPVEELVQRLLGR--GRADDTEDIIR 138
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_COREF (Adenylate kinase OS=Corynebacterium efficiens GN=adk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.486e-17
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNRNQGREDDNVETIR 584
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   +  I  GK+VP++VT +++Q  + E+   + FL+DGFPR  E+     + + K     + V+ +  SE+ +  R+L+R  GR DDN ETIR
Sbjct:    6 LGPPGAGKGTQAAILSEKLGIPHISTGDLFRANIGEGTPLGIEAKQYIDAGKLVPTDVTARMVQSRLAEADAAEGFLLDGFPRTVEQADILADLLDKAGNPLDGVINYQVSEDVVVERMLSR--GRADDNEETIR 138
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRGG (Adenylate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=adk PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.857e-17
Identity = 44/128 (34.38%), Postives = 72/128 (56.25%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGRED 563
            +G PG+GKGTQ A + ++    H++ GDL RA I  G++ G   +  +  G++VP EVTI + +  M ++     FL+DGFPRN     A + + K   ++ + VL  +  E+E+ +RI  R   R +
Sbjct:    6 VGPPGAGKGTQAAYLAQNLSIPHIATGDLFRANISQGTDLGKQARAYMDAGQLVPDEVTIGMAKDRMAQADAAGGFLLDGFPRNVGQAEALDVMLKDEGVKLDAVLDLEVPEDEVVKRIAGRRVCRNN 133

HSP 2 Score: 28.8758 bits (63), Expect = 3.857e-17
Identity = 15/47 (31.91%), Postives = 22/47 (46.81%), Query Frame = 1 
Query:  589 RFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKDE 729
            R +V+   + P++ YY A+G V  I A   VA+V           DE
Sbjct:  172 RLEVYHTQTEPIIDYYRAQGLVVTISALGKVADVTARAMEALKASDE 218
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRZT (Adenylate kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRZP (Adenylate kinase OS=Streptococcus pneumoniae (strain P1031) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRZJ (Adenylate kinase OS=Streptococcus pneumoniae (strain JJA) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRR6 (Adenylate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRPJ (Adenylate kinase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRPI (Adenylate kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.863e-17
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIR 584
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E ++  + +     E +  RI++R  G                    REDD  ET++
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVK 165

HSP 2 Score: 31.187 bits (69), Expect = 3.863e-17
Identity = 13/44 (29.55%), Postives = 24/44 (54.55%), Query Frame = 1 
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            +R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:  166 RRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STRP42.971e-1734.36Adenylate kinase OS=Streptococcus pneumoniae serot... [more]
KAD_MYCA93.486e-1740.00Adenylate kinase OS=Mycobacterium abscessus (strai... [more]
KAD_COREF3.486e-1740.74Adenylate kinase OS=Corynebacterium efficiens GN=a... [more]
KAD_STRGG3.857e-1734.38Adenylate kinase OS=Streptomyces griseus subsp. gr... [more]
KAD_STRZT3.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRZP3.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRZJ3.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRR63.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRPJ3.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]
KAD_STRPI3.863e-1733.74Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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