DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_MOUSE (Adenylate kinase 2, mitochondrial OS=Mus musculus GN=Ak2 PE=1 SV=5)

HSP 1 Score: 79.337 bits (194), Expect = 1.099e-16
Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME-ESGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   + E+F   HL+ GD+LRA + SGSE G  ++  +  GK+V  E+ ++L++K +E  S  + FL+DGFPR        + +    K + + V+ F   +  + RRI  R
Sbjct:   21 LGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPSCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIQDSLLIRRITGR 142          

HSP 2 Score: 28.1054 bits (61), Expect = 1.099e-16
Identity = 14/48 (29.17%), Postives = 26/48 (54.17%), Query Frame = 1
Query:  574 RQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 717
            + L  R + +   + P+V+YY  +G    IDA++    VF ++ A F+
Sbjct:  181 KALKTRLEAYHTQTTPLVEYYRKRGIHCAIDASQTPDIVFASILAAFS 228          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_TREDE (Adenylate kinase OS=Treponema denticola GN=adk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-16
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGT    + + +   H+S GDL RA IK  ++ G  ++ +I  G +V  ++TI L+++ +E     K F++DGFPR      A E + KI+   V+ FD S++E+ +R+  R
Sbjct:    6 LGPPGAGKGTLAFEVSKSYKIPHISTGDLFRAAIKEQTDLGKKVKAVIDSGALVSDDLTIALVKERLERDDTKKGFILDGFPRTIAQADALEDIVKIDS--VINFDISDDEVIKRLSGR 122          

HSP 2 Score: 26.9498 bits (58), Expect = 1.104e-16
Identity = 12/48 (25.00%), Postives = 22/48 (45.83%), Query Frame = 1
Query:  571 LRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 714
            +  + KR + +   + P++ YY  K  +  IDA     +V  + K  F
Sbjct:  160 IEAIQKRLETYRNQTAPLIDYYTKKDLIVNIDARPASEKVLASFKVKF 207          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PROM0 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.325e-16
Identity = 50/137 (36.50%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIREAV 593
            LG PG+GKGTQ   I +   Y HLS G+LLR EI+  +  G  +++++  G++V  E+ +K++++ + +  N  +++DG+PRN  +  +  E + +I    E V + D  EE + +R+L R  GR+DD  ETIR  V
Sbjct:    8 LGAPGAGKGTQAELISQSNSYLHLSTGELLRKEIEMNTALGIQVKDIMNRGELVSDELVLKIVRQNLVKD-NKGWILDGYPRNLSQANSLNEVLNEINQPLELVFYLDIPEEVLIKRLLLR--GRKDDTEETIRTRV 141          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPY (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPS (Adenylate kinase OS=Yersinia pseudotuberculosis GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPP (Adenylate kinase OS=Yersinia pestis (strain Pestoides F) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPN (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPG (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPE (Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_YERPB (Adenylate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=adk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GSE G   + ++  GK+V  E+ I L+ ++  +E   D FL+DGFPR      A +    I+ ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKE-AGIKVDYVLEFDVPDELIVERIVGR 123          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD2_MOUSE1.099e-1636.89Adenylate kinase 2, mitochondrial OS=Mus musculus ... [more]
KAD_TREDE1.104e-1636.13Adenylate kinase OS=Treponema denticola GN=adk PE=... [more]
KAD_PROM01.325e-1636.50Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_YERPY1.730e-1640.34Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPS1.730e-1640.34Adenylate kinase OS=Yersinia pseudotuberculosis GN... [more]
KAD_YERPP1.730e-1640.34Adenylate kinase OS=Yersinia pestis (strain Pestoi... [more]
KAD_YERPN1.730e-1640.34Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPG1.730e-1640.34Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPE1.730e-1640.34Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV... [more]
KAD_YERPB1.730e-1640.34Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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