DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_XYLFA (Adenylate kinase OS=Xylella fastidiosa GN=adk PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.436e-16
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKIEPEF--VLFFDCSEEEMERRILNRNQ--GREDDNVETIRE 587
            LG PGSGKGTQ A + E     H+S GDLLR+E+ +G+  G   + ++ +G +V   + I +L+  +  +   K F++DG+PRN    AA +  + K+      V+  +   + +  RI  R Q  GREDD  + +R+
Sbjct:    6 LGPPGSGKGTQAAQMKETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILIGMLESRLSHTDVVKGFILDGYPRNLSQAAALDGLLAKLGHPLNAVVQLEVPTDVLVERIAGRAQAEGREDDTPDAVRK 143          

HSP 2 Score: 28.8758 bits (63), Expect = 2.436e-16
Identity = 11/35 (31.43%), Postives = 23/35 (65.71%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 690
            KR +V+ +S+ PV+ +Y+ +G + ++D    + EV
Sbjct:  143 KRLQVYNDSTAPVIGFYQQRGILLRVDGVGRLDEV 177          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_RHOE4 (Adenylate kinase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 53/135 (39.26%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIR 584
            LG PG+GKGTQ A + E FG  H+S GDL RA I   +  G   +  I  G++VPS +T  +++ +  E    + FL+DGFPR+ E   A E + K      + VL F   E+ +  R+L R  GR DD  + IR
Sbjct:    6 LGPPGAGKGTQAAILSEKFGVPHISTGDLFRANIGQATALGVEAKKYIDAGELVPSSITNDMVKARVAEPDAANGFLLDGFPRSVEQAQALEGILKDLDTRLDGVLSFVVDEDIVVERMLAR--GRADDTEDVIR 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_HYDS0 (Adenylate kinase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 41/121 (33.88%), Postives = 71/121 (58.68%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PGSGKGTQ A +     + H+S GD+LRAE+   S  G   +  +K+G +VP ++ I +++  + E+ +  ++ DGFPRN     AFE +    +++ + V +FD  ++ + +R+  R
Sbjct:    6 LGPPGSGKGTQGALLKSELSFEHISTGDMLRAEVSKKSPLGLKAEEYMKQGLLVPDDLIIAMIKNILTEAPHKNYVFDGFPRNVNQAEAFETMLNTMRLQVDKVFYFDLEDDVIIKRLSGR 126          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_ECO8A (Adenylate kinase OS=Escherichia coli O8 (strain IAI1) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E  ++ FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCHNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CORJK (Adenylate kinase OS=Corynebacterium jeikeium (strain K411) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQGREDDNVETIR 584
            LG PG+GKGTQ + + +     H+S GDL RA I  G++ G   Q  +  GK+VP+ VT  +++  + +E   D FL+DGFPR  E     E + + +    + V+ +  SE+ +  R+L R  GR DDN +TIR
Sbjct:    6 LGPPGAGKGTQASLLSDALKVPHISTGDLFRANISQGTDLGKQAQEYMDAGKLVPTSVTADMVRDRLNQEDAADGFLLDGFPRTIEQAELLEKMLQDDGHSLDAVINYVVSEDVVVDRMLAR--GRNDDNEDTIR 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CAMJJ (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEH--FGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDD 566
            +G PGSGK T  + I +      TH S GDLLRAE+ SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G +D+
Sbjct:    8 IGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDN 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CAMJ8 (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=adk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.951e-16
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEH--FGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDD 566
            +G PGSGK T  + I +      TH S GDLLRAE+ SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G +D+
Sbjct:    8 IGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDN 138          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THET8 (Adenylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=adk PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.855e-16
Identity = 49/139 (35.25%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            LG PG+GKGTQ + + +  G+  LS GD+LR  +  G+  G  ++ +++ G +VP ++ ++L+++ + E    + + DGFPR     A  EA+ ++  E       V+  +  EEE+ RRIL R   +GR DDN ET+R
Sbjct:   10 LGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREELAE----RVIFDGFPR---TLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRILRRAELEGRSDDNEETVR 141          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THET2 (Adenylate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.855e-16
Identity = 49/139 (35.25%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            LG PG+GKGTQ + + +  G+  LS GD+LR  +  G+  G  ++ +++ G +VP ++ ++L+++ + E    + + DGFPR     A  EA+ ++  E       V+  +  EEE+ RRIL R   +GR DDN ET+R
Sbjct:   10 LGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREELAE----RVIFDGFPR---TLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRILRRAELEGRSDDNEETVR 141          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHISS (Adenylate kinase OS=Shigella sonnei (strain Ss046) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.855e-16
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGR 123          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_XYLFA2.436e-1634.06Adenylate kinase OS=Xylella fastidiosa GN=adk PE=3... [more]
KAD_RHOE42.951e-1639.26Adenylate kinase OS=Rhodococcus erythropolis (stra... [more]
KAD_HYDS02.951e-1633.88Adenylate kinase OS=Hydrogenobaculum sp. (strain Y... [more]
KAD_ECO8A2.951e-1640.34Adenylate kinase OS=Escherichia coli O8 (strain IA... [more]
KAD_CORJK2.951e-1637.78Adenylate kinase OS=Corynebacterium jeikeium (stra... [more]
KAD_CAMJJ2.951e-1637.40Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD_CAMJ82.951e-1637.40Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD_THET83.855e-1635.25Adenylate kinase OS=Thermus thermophilus (strain H... [more]
KAD_THET23.855e-1635.25Adenylate kinase OS=Thermus thermophilus (strain H... [more]
KAD_SHISS3.855e-1640.34Adenylate kinase OS=Shigella sonnei (strain Ss046)... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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