DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_GLUDA (Adenylate kinase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   +   +G   +S GD+LRAE+ + S  G   + ++  G++VP +V + +L+  + +    K F++DGFPR +    A +++ K      + VLF +  EE +  RI  R
Sbjct:    6 LGPPGAGKGTQSKRLEARYGIAQISTGDMLRAEVAAESAIGKQARALMDAGQLVPDDVIVAMLESRIAQPDCAKGFILDGFPRTQGQAVALDSMLKRRGARIDVVLFLEVDEEALADRIAGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_ENTFA (Adenylate kinase OS=Enterococcus faecalis GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK 476
            +G PG+GKGTQ   I++ +G  H+S GD+ RA +K+ +  G   ++ I +G++VP EVT  ++++ + E   DK FL+DGFPR  +   A + + K
Sbjct:    6 MGLPGAGKGTQAEKIIDTYGIPHISTGDMFRAAMKNETALGLEAKSYIDKGELVPDEVTNGIVKERLAEPDTDKGFLLDGFPRTLDQAKALDTMLK 101          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_DESHY (Adenylate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFD--CSEEEMERRILNRNQGR 557
            +G PG+GKGTQ A+++  +   H+S GD+ RA IK+G+  G   +  +  G +VP EVTI ++ + + E    K FL+DGFPR     A  +A+ KI  +  +  D   + E  E ++L R  GR
Sbjct:    6 MGPPGAGKGTQAADLITRYQIPHISTGDMFRAAIKAGTALGMKAKEYMDAGSLVPDEVTIGIVAERLAEPDCSKGFLLDGFPRTV---AQADALDKILTQLKMNLDGVINIEVPEAKLLERLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_DESHD (Adenylate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFD--CSEEEMERRILNRNQGR 557
            +G PG+GKGTQ A+++  +   H+S GD+ RA IK+G+  G   +  +  G +VP EVTI ++ + + E    K FL+DGFPR     A  +A+ KI  +  +  D   + E  E ++L R  GR
Sbjct:    6 MGPPGAGKGTQAADLITRYQIPHISTGDMFRAAIKAGTALGMKAKEYMDAGSLVPDEVTIGIVAERLAEPDCSKGFLLDGFPRTV---AQADALDKILTQLKMNLDGVINIEVPEAKLLERLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CLAMS (Adenylate kinase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIREAV*GFLRI*SP 620
            +G PG+GKGTQ   I    G   +S GD+ R  IK  +E G  +Q ++  G  VP E+T +L+  +  EE     FL+DG+PR     A  E + +    E + V+     E+E+  R+  R   QGR DD  + IR     ++R  SP
Sbjct:    7 VGPPGAGKGTQAKRIAADRGIPDVSTGDIFRQNIKDRTELGQQVQALVDAGNYVPDELTNRLVTVRLQEEDAQAGFLLDGYPRTLAQVAYLEELLQGWGQELDAVIQLVADEDEVVARLTRRAAEQGRADDGEDEIRHRQEVYVRETSP 155          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACHD (Adenylate kinase OS=Bacillus halodurans GN=adk PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNR 545
            +G PG+GKGTQ   I+E +G  H+S GD+ RA +K+ +E G   ++ +  G++VP EVTI +++ +  ++   + FL+DGFPR      A E   A    + ++V+  D  E+ +  R+  R
Sbjct:    6 MGLPGAGKGTQAEKIIEKYGIPHISTGDMFRAAMKNETELGLKAKSYMDAGELVPDEVTIGIVRDRLSQDDCQNGFLLDGFPRTVAQAEALEDILASLDKKLDYVINIDVPEQLLMDRLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACCN (Adenylate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK 476
            +G PG+GKGTQ   IV  +   H+S GD+ RA +K+ +E G   ++ I +G +VP EVTI ++++ + +    K FL+DGFPR     +A E + K
Sbjct:    6 MGLPGAGKGTQAEQIVAKYNIPHISTGDMFRAAMKAETELGLQAKSFIDKGALVPDEVTIGIVRERLSQEDCKKGFLLDGFPRTVAQASALEEIMK 101          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_AERS4 (Adenylate kinase OS=Aeromonas salmonicida (strain A449) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.371e-13
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E  G   +S GD+LRA IK+G+E G   + ++  G++V  ++ I L+++ + +    + FL+DGFPR      A +    +  +FVL FD  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEKHGIPQISTGDMLRAAIKAGTELGLNAKAVMDAGQLVSDDIIIGLVKERIAQPDCANGFLLDGFPRTIPQAQAMKD-AGVVVDFVLEFDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CHLMU (Adenylate kinase OS=Chlamydia muridarum GN=adk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.683e-13
Identity = 39/134 (29.10%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFL--------------IDGFPRN-EENRAAFEAVTKIEPEF-VLFFDCSEEEMERRILNR 545
            +G PGSGKGTQ   +       H+S+GDLLR  +   +  G  I++ + +GK++P ++  KL+ + ++E   D  L              +DGFPR   + +   E +    P++ ++  D S+EE+  R+ +R
Sbjct:   11 MGAPGSGKGTQSKLLASQLSLQHISSGDLLRNAVSQNTPLGQEIKSYLDQGKLLPDQLVWKLVHEKLDELQQDTLLRKLSFLSRSENGAILDGFPRTVAQAKLLNEFLCSYFPDYKIILLDISDEEVLNRLTSR 144          

HSP 2 Score: 28.1054 bits (61), Expect = 1.683e-13
Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 1
Query:  589 RFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 693
            R + + + + PV+ YY A  ++  IDA  P  +VF
Sbjct:  184 RIQTYKQETQPVLDYYAALQRLITIDANAPTQQVF 218          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THESQ (Adenylate kinase OS=Thermotoga sp. (strain RQ2) GN=adk PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.692e-13
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEI-KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGT    + E  G  H+S GD+ R  + K   E G  I+ +++ G++VP E+  +++++ + E   ++ F++DG+PR        +   K    E    + F+  EE + +R+  R
Sbjct:    8 LGPPGAGKGTYAKRLQEITGIPHISTGDIFRDIVKKENDELGKKIKEIMERGELVPDELVNEVVKRRLSEKDCERGFILDGYPRTVAQAEFLDDFLKNQNKELTAAVLFEVPEEVVVQRLTAR 130          

HSP 2 Score: 35.8094 bits (81), Expect = 1.692e-13
Identity = 17/50 (34.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 702
            ++K  T+R    R+KV+LE + PV+ YY+ KG ++++D    +  V   V
Sbjct:  165 DDKEETVRH---RYKVYLEKTQPVIDYYDKKGILKRVDGTIGIDNVIAEV 211          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_GLUDA1.371e-1333.61Adenylate kinase OS=Gluconacetobacter diazotrophic... [more]
KAD_ENTFA1.371e-1338.54Adenylate kinase OS=Enterococcus faecalis GN=adk P... [more]
KAD_DESHY1.371e-1336.80Adenylate kinase OS=Desulfitobacterium hafniense (... [more]
KAD_DESHD1.371e-1336.80Adenylate kinase OS=Desulfitobacterium hafniense (... [more]
KAD_CLAMS1.371e-1334.23Adenylate kinase OS=Clavibacter michiganensis subs... [more]
KAD_BACHD1.371e-1334.43Adenylate kinase OS=Bacillus halodurans GN=adk PE=... [more]
KAD_BACCN1.371e-1339.58Adenylate kinase OS=Bacillus cereus subsp. cytotox... [more]
KAD_AERS41.371e-1336.97Adenylate kinase OS=Aeromonas salmonicida (strain ... [more]
KAD_CHLMU1.683e-1329.10Adenylate kinase OS=Chlamydia muridarum GN=adk PE=... [more]
KAD_THESQ1.692e-1329.27Adenylate kinase OS=Thermotoga sp. (strain RQ2) GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
back to top