DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PROMH (Adenylate kinase OS=Proteus mirabilis (strain HI4320) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E++G   +S GD+LRA + +G+E G   + ++  G++V  E+ I L+++ +++    + FL+DGFPR      A +    I  +FVL F   +E +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIKENYGIPQISTGDMLRAAVSAGTELGLKAKALMDNGQLVTDELVIALVKERIKQDDCRNGFLLDGFPRTIPQADAMKE-AGINVDFVLEFAVPDEIIVERIVGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_MYCCT (Adenylate kinase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=adk PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR 545
            LG PG GKGTQ   +V    +  +S GDL+R EI   +  G   Q  +  GK VP ++  +++ + ++ + NDK + DG+PR  E   + E +  +   + ++V + D +E+ + +RI NR
Sbjct:    6 LGAPGCGKGTQAEQLVNKLNFIQVSTGDLMRKEISLNTTLGLKCQEYMNAGKYVPDQIVNQIVNQFLQYN-NDKLIFDGYPRTLEQAKSLEKMLDLYNKKIDYVFYIDVNEQILIKRITNR 125          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_METBU (Adenylate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 40/121 (33.06%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            G PG+GKGTQ   + +H+   H+S GD+LRA ++ G++ G   +  + +G++VP EV I +++  + ES     +L+DG+PR      A  ++     +  E VL  D ++EE+  R+  R
Sbjct:    7 GPPGAGKGTQAKELDKHYQIPHISTGDILRANVRDGTKLGKEAKGYMDKGELVPDEVLIGVIKNRLAESDCKPGYLLDGYPRTTPQADALSSILVEIGMPLEVVLNIDVADEELVTRLCGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_MARMS (Adenylate kinase OS=Marinomonas sp. (strain MWYL1) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 42/119 (35.29%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GSE G   + ++  G++V  ++ I L+++ + ++   +  L DGFPR      A +    +E ++V+  D ++EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFITEEFGIPQISTGDMLRAAVKAGSEMGLKAKAVMDAGQLVSDDIIIGLVKERLTQDDCANGALFDGFPRTIPQADALKD-AGVEIDYVVEIDVADEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LAWIP (Adenylate kinase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 42/128 (32.81%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNRNQGREDDN 569
            G  GSGKGTQ   I + FG TH+ +G + R  I  G+E G   ++ I +G++VP ++TI ++ + ++  G   +L+DGFPRN  + +   EA+ K  ++ ++V+      E  + RI+ R   + ++N
Sbjct:    7 GPNGSGKGTQGELIQKAFGITHIESGVIFREHISKGTELGKQAKSYIDKGELVPDDITIPMILETLQIKGKSGWLLDGFPRNITQAQKLHEAMLKKGVKLDYVIEITLPREVAKSRIIGRRICKTNNN 134          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CLOD6 (Adenylate kinase OS=Clostridium difficile (strain 630) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRN 440
            LG PG+GKGTQ   IVE +   H+S GD+ R  IK G+E G   +  + +G +VP E+T+ L+  +  +E   + F++DGFPRN
Sbjct:    6 LGPPGAGKGTQAVGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTVGLVTDRISQEDCKNGFMLDGFPRN 89          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACSK (Adenylate kinase OS=Bacillus clausii (strain KSM-K16) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAV 470
            +G PG+GKGTQ   IV  +G  H+S GD+ RA +K+ +E G   ++ I  G +VP EVTI ++++ + E+   + FL+DGFPR      A E +
Sbjct:    6 MGLPGAGKGTQAEKIVNDYGIPHISTGDMFRAAMKNETELGLKAKSFIDAGDLVPDEVTIGIVKERLSEDDCENGFLLDGFPRTIAQAEALEGI 99          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACP2 (Adenylate kinase OS=Bacillus pumilus (strain SAFR-032) GN=adk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK 476
            +G PG+GKGTQ   IV+ +G  H+S GD+ RA +K  ++ G   ++ I +G++VP EVTI ++++ + ++  ++ FL+DGFPR      A E + K
Sbjct:    6 MGLPGAGKGTQAERIVDDYGIPHISTGDMFRAAMKEETQLGLEAKSFIDKGELVPDEVTIGIVRERLGKNDCEQGFLLDGFPRTVAQAEALEDILK 101          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_PONAB (Adenylate kinase 2, mitochondrial OS=Pongo abelii GN=AK2 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   + E+F   HL+ GD+LRA + SGSE G  ++  +  GK+V  E+ ++L++K +E     + FL+DGFPR        + +    K + + V+ F   +  + RRI  R
Sbjct:   21 LGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGR 142          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_HUMAN (Adenylate kinase 2, mitochondrial OS=Homo sapiens GN=AK2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.791e-13
Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   + E+F   HL+ GD+LRA + SGSE G  ++  +  GK+V  E+ ++L++K +E     + FL+DGFPR        + +    K + + V+ F   +  + RRI  R
Sbjct:   21 LGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGR 142          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PROMH1.791e-1336.13Adenylate kinase OS=Proteus mirabilis (strain HI43... [more]
KAD_MYCCT1.791e-1332.23Adenylate kinase OS=Mycoplasma capricolum subsp. c... [more]
KAD_METBU1.791e-1333.06Adenylate kinase OS=Methanococcoides burtonii (str... [more]
KAD_MARMS1.791e-1335.29Adenylate kinase OS=Marinomonas sp. (strain MWYL1)... [more]
KAD_LAWIP1.791e-1332.81Adenylate kinase OS=Lawsonia intracellularis (stra... [more]
KAD_CLOD61.791e-1342.86Adenylate kinase OS=Clostridium difficile (strain ... [more]
KAD_BACSK1.791e-1340.43Adenylate kinase OS=Bacillus clausii (strain KSM-K... [more]
KAD_BACP21.791e-1338.54Adenylate kinase OS=Bacillus pumilus (strain SAFR-... [more]
KAD2_PONAB1.791e-1336.07Adenylate kinase 2, mitochondrial OS=Pongo abelii ... [more]
KAD2_HUMAN1.791e-1336.07Adenylate kinase 2, mitochondrial OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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