DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_ARATH (Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.188e-13
Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            +G PGSGKGTQ   + + +   HLS GD+LRA + S +  G   +  +++G++V  ++ + ++ +AM +    K F++DGFPR        + + K    E + VL F   +  +E RI  R
Sbjct:   39 IGPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSDDLVVGIIDEAMNKPKCQKGFILDGFPRTVTQAEKLDEMLKRRGTEIDKVLNFAIDDAILEERITGR 160          

HSP 2 Score: 27.7202 bits (60), Expect = 2.188e-13
Identity = 15/42 (35.71%), Postives = 18/42 (42.86%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 705
            L  R   F   + PV+ YY  K  +  I A K   EV   VK
Sbjct:  201 LKSRLAAFHSQTQPVIDYYAKKAVLTNIQAEKAPQEVTSEVK 242          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHELP (Adenylate kinase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 43/119 (36.13%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  E+ I L+++ + +    K FL+DGFPR      A  A + I+ + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AASGIDIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_MYCMS (Adenylate kinase OS=Mycoplasma mycoides subsp. mycoides SC GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 38/121 (31.40%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR 545
            LG PG GKGTQ   +V    +  +S GDL+R EI   +  G   Q  +  GK VP ++  +++ + ++ + NDK + DG+PR  E   + E +  +   + ++V + D +++ + +RI NR
Sbjct:    6 LGAPGCGKGTQAEQLVNKLNFIQVSTGDLMRKEISLNTRLGLKCQEYMNAGKYVPDQIVNQIVSQFLKNT-NDKLIFDGYPRTLEQAKSLEQMLDLYNKKIDYVFYIDVNDQILIKRITNR 125          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LISMF (Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            +G PG+GKGTQ   IVE +   H+S GD+ RA +K+ +E G   ++ +  G +VP EVT  ++++ + E+   + FL+DGFPR  E     E +      E + V+  +  ++ + +R+  R
Sbjct:    6 MGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKNGFLLDGFPRTVEQAEELENILNDLGTELDAVINIEVDKDVLMKRLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LISMC (Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            +G PG+GKGTQ   IVE +   H+S GD+ RA +K+ +E G   ++ +  G +VP EVT  ++++ + E+   + FL+DGFPR  E     E +      E + V+  +  ++ + +R+  R
Sbjct:    6 MGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKNGFLLDGFPRTVEQAEELENILNDLGTELDAVINIEVDKDVLMKRLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LISIN (Adenylate kinase OS=Listeria innocua GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            +G PG+GKGTQ   IVE +   H+S GD+ RA +K+ +E G   ++ +  G +VP EVT  ++++ + E+   + FL+DGFPR  E     E +      E + V+  +  ++ + +R+  R
Sbjct:    6 MGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKNGFLLDGFPRTVEQAEELENILSDLGTELDAVINIEVDKDVLMKRLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEIXX (Adenylate kinase OS=Leifsonia xyli subsp. xyli GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILN--RNQGREDDNVETIREAV*GFLRI*SP 620
            +G PG+GKGTQ + I   +G   +S GD+ RA IK+ +E G  ++ ++  G  VP  +T +L+  +  E+     FL+DG+PR  E     + +   + E    V+      EE+  R+    R QGR DD+ E IR     ++R  SP
Sbjct:    4 VGPPGAGKGTQASRITSGYGIPDISTGDIFRANIKNKTELGQQVKAIVDAGDYVPDSLTNELVTGRLAEDDAKGGFLLDGYPRTLEQVKYLDELLGSDGEKLDAVIQLVADREEIVARLTKRAREQGRADDSEEAIRYRQEVYVRETSP 152          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACWK (Adenylate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.339e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK 476
            +G PG+GKGTQ   IV  +   H+S GD+ RA +K+ +E G   ++ I +G +VP EVTI ++++ + +    K FL+DGFPR     +A E + K
Sbjct:    6 MGLPGAGKGTQAEQIVAKYNIPHISTGDMFRAAMKAETELGLQAKSFIDKGALVPDEVTIGIVRERLSQEDCIKGFLLDGFPRTVAQASALEEIMK 101          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEPCP (Adenylate kinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.857e-13
Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ A I   +G   +S GD+LRA +K+G+E G   + ++  G +V  ++ I L+ ++ +++   + FL DGFPR      A +A   ++ + VL  D   E +  R+  R
Sbjct:    6 LGAPGAGKGTQAAFICRKYGIPQISTGDMLRAAVKAGTEMGLAAKKVMDAGGLVSDDIIIGLVKERILQDDCANGFLFDGFPRTIPQAEAMKA-AGVKLDLVLEIDVPSEAIIERMSGR 123          

HSP 2 Score: 22.3274 bits (46), Expect = 2.857e-13
Identity = 15/42 (35.71%), Postives = 22/42 (52.38%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKP 678
            ++K  T+R   KR +V+   + P+V YY A       DAA P
Sbjct:  158 DDKEETVR---KRLEVYQAQTRPLVDYYSAWAATG--DAAAP 194          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEGPA (Adenylate kinase OS=Legionella pneumophila (strain Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.857e-13
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR      A +   +I  + V+     +EE+  RI  R
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPRTLVQAEALKD-AEIHLDHVIEIAVDDEEIIERISGR 123          

HSP 2 Score: 25.0238 bits (53), Expect = 2.857e-13
Identity = 16/61 (26.23%), Postives = 30/61 (49.18%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAK--------PVAEVFDAVKAV 711
            ++K  T+R   KR +V+   + P+VQYY+   +    +A K         V ++FD +  +
Sbjct:  158 DDKEETIR---KRLQVYHSQTAPLVQYYKEWAETGSKEAPKFHTISGTGTVEQIFDNIVTI 215          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_ARATH2.188e-1331.97Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
KAD_SHELP2.339e-1336.13Adenylate kinase OS=Shewanella loihica (strain ATC... [more]
KAD_MYCMS2.339e-1331.40Adenylate kinase OS=Mycoplasma mycoides subsp. myc... [more]
KAD_LISMF2.339e-1332.79Adenylate kinase OS=Listeria monocytogenes serotyp... [more]
KAD_LISMC2.339e-1332.79Adenylate kinase OS=Listeria monocytogenes serotyp... [more]
KAD_LISIN2.339e-1332.79Adenylate kinase OS=Listeria innocua GN=adk PE=3 S... [more]
KAD_LEIXX2.339e-1332.89Adenylate kinase OS=Leifsonia xyli subsp. xyli GN=... [more]
KAD_BACWK2.339e-1339.58Adenylate kinase OS=Bacillus weihenstephanensis (s... [more]
KAD_LEPCP2.857e-1334.45Adenylate kinase OS=Leptothrix cholodnii (strain A... [more]
KAD_LEGPA2.857e-1333.61Adenylate kinase OS=Legionella pneumophila (strain... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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