DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEDO (Adenylate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I++ +G   +S GD+LRA +K+G+  G   + ++  G++V  E+ I L+++ + +    K FL+DGFPR      A  A   IE + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMQQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERIAQDDCVKGFLLDGFPRTIPQADAM-AANGIEIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_METBF (Adenylate kinase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 40/121 (33.06%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            G PG+GKGTQ   +V+++G   +S GD+LRA ++ G+E G   +  + +G++VP EV I +++  ++E   +K F++DG+PR      A   +        + VL  +  +EE+  RI  R
Sbjct:    7 GPPGAGKGTQAKKMVDNYGIPQISTGDILRANVREGTELGLAAKEYMDKGELVPDEVLIGIIKNRLKEQDCEKGFILDGYPRTIPQADALAVILDEINKPIDVVLNLEVPDEELIERISGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEUMM (Adenylate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQGREDDNVETI 581
            LG PG+GKGTQ   IV+ +   H+S GD+ RA +   +E G   +  +  G +VP E+T  ++   + +   +  F++DG+PRNE      +       + V   L+F+ ++  +  R+L R  GR DD  E I
Sbjct:    8 LGLPGAGKGTQADFIVKDYSIVHISTGDIFRANLAENTELGQKARQFMDAGDLVPDEITNAMVADRLNQQDVETGFMLDGYPRNEAQAVFLDKYLSDNGKSVSATLYFEVADTLLRERLLGR--GRADDTPEVI 139          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LACRJ (Adenylate kinase OS=Lactobacillus reuteri (strain JCM 1112) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFE 464
            +G PG+GKGTQ   IVE+F   H+S GD+ RA +K+ +  G   +  I +G++VP EVT  ++++ + ++   D F++DGFPRN    AA +
Sbjct:    6 MGLPGAGKGTQAQKIVENFPIPHISTGDIFRAAMKNETPMGIEAKKYIDKGELVPDEVTNGIVKERLAQDDTKDGFMLDGFPRNLNQAAALD 97          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_CALS8 (Adenylate kinase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.054e-13
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFD--CSEEEMERRILNRNQGR 557
            LG PG+GKGTQ   +   FG  H+S GD+LR  +K+ +E G   +  + +G +VP E+ I++++ + M++   + FL+DGFPR     A  EA+ K+  +     D   + E  + +IL R  GR
Sbjct:    6 LGAPGAGKGTQAEYLSSRFGIPHISTGDILRENVKNQTELGKKAKEYMDKGLLVPDEIVIEIVKNRLMQDDCKNGFLLDGFPR---TIAQAEALEKVLADLGQKIDKVLNIEVPDEKILERMSGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD1_ORYSJ (Adenylate kinase A OS=Oryza sativa subsp. japonica GN=ADK-A PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.696e-13
Identity = 39/124 (31.45%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSEEEMERRILNR 545
            +G PG GKGTQ   I + F   HL+ GD+LRA + + +  G   +  + +G++V  ++ + ++ +AM+++   K F++DGFPR        + +     TKI+   VL F   +  +E RI  R
Sbjct:   34 VGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDK--VLNFAIDDAILEERITGR 155          

HSP 2 Score: 31.187 bits (69), Expect = 3.696e-13
Identity = 17/46 (36.96%), Postives = 22/46 (47.83%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 690
            + K  T   L  R + F   + PV+ YY  KG V  + A KP  EV
Sbjct:  187 QRKDDTAAVLKSRLEAFHVQTKPVIDYYTKKGIVANLHAEKPPKEV 232          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_METFK (Adenylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.712e-13
Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E F    +S GD+LRA +K+G++ G   +  +  G +VP +V I L+++ ++++     FL DGFPR      A +    ++ ++V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQATFIKEAFDIPQISTGDMLRAAVKAGTQLGLEAKRYMDSGGLVPDDVIIGLVKERIKDADCQQGFLFDGFPRTIPQAEAMKQ-AGVDIDYVVEIDVPDEEIIKRMSGR 123          

HSP 2 Score: 20.4014 bits (41), Expect = 3.712e-13
Identity = 7/19 (36.84%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYY 636
            + KR +V+   + P+V YY
Sbjct:  164 VAKRLEVYHRQTKPLVDYY 182          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEGPC (Adenylate kinase OS=Legionella pneumophila (strain Corby) GN=adk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.712e-13
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR      A +   +I  + V+     +EE+  RI  R
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPRTLVQAEALKD-AEIHLDHVIEIAVDDEEIIERISGR 123          

HSP 2 Score: 24.6386 bits (52), Expect = 3.712e-13
Identity = 16/61 (26.23%), Postives = 28/61 (45.90%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYY--------EAKGKVRKIDAAKPVAEVFDAVKAV 711
            ++K  T+R   KR +V+   + P+VQYY        +   K   I     V ++FD +  +
Sbjct:  158 DDKEETIR---KRLQVYHSQTAPLVQYYKEWAESGSKEAPKFHTISGTGTVEQIFDNIVTI 215          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_STRU0 (Adenylate kinase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=adk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.989e-13
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG--NDKFLIDGFPRNEENRAAFEA 467
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G +VP EVT  ++++ + +       FL+DG+PR  +   A +A
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVIHISTGDMFRAAMANQTEMGLLAKSYIDKGDLVPDEVTNGIVKERLSQDDIKEKGFLLDGYPRTIDQAHALDA 99          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PHOPR (Adenylate kinase OS=Photobacterium profundum GN=adk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.989e-13
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN----QGREDDNV 572
            LG PG+GKGTQ   I+  FG   +S GD+LRA IK+G+E G   +++I  G++V  ++ + L+++ + +    K FL+DGFPR        + V  +  ++V+ FD ++  +  R+  R      GR   NV
Sbjct:    6 LGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLKEV-GVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNV 136          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SHEDO3.054e-1336.13Adenylate kinase OS=Shewanella denitrificans (stra... [more]
KAD_METBF3.054e-1333.06Adenylate kinase OS=Methanosarcina barkeri (strain... [more]
KAD_LEUMM3.054e-1332.09Adenylate kinase OS=Leuconostoc mesenteroides subs... [more]
KAD_LACRJ3.054e-1340.22Adenylate kinase OS=Lactobacillus reuteri (strain ... [more]
KAD_CALS83.054e-1335.20Adenylate kinase OS=Caldicellulosiruptor saccharol... [more]
KAD1_ORYSJ3.696e-1331.45Adenylate kinase A OS=Oryza sativa subsp. japonica... [more]
KAD_METFK3.712e-1334.45Adenylate kinase OS=Methylobacillus flagellatus (s... [more]
KAD_LEGPC3.712e-1333.61Adenylate kinase OS=Legionella pneumophila (strain... [more]
KAD_STRU03.989e-1339.36Adenylate kinase OS=Streptococcus uberis (strain A... [more]
KAD_PHOPR3.989e-1334.09Adenylate kinase OS=Photobacterium profundum GN=ad... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
back to top