DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEFN (Adenylate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   IE + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AENGIEIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_MYCPA (Adenylate kinase OS=Mycobacterium paratuberculosis GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 44/134 (32.84%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETI 581
            LG PG+GKGTQ   + E  G   +S G+L R+ I++G++ G   +  +  G +VP+E+T +L+   + E    + F++DGFPR+ +   A   + +    + + VL F  S++E+  R+  + +GR DD  E I
Sbjct:    6 LGPPGAGKGTQAQKLSEKLGIPQISTGELFRSNIENGTKLGLEAKRYLDAGDLVPAELTNQLVDDRLSEPDAANGFILDGFPRSLQQAKALHEMLERRGTDIDAVLEFRVSQDELLARL--KARGRADDTDEVI 137          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEPIN (Adenylate kinase OS=Leptospira interrogans GN=adk PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            +G PG+GKGTQ   + E      +S GD+LR  +K+ +  G   +  +  G +VP  V I +++  + E+   + FL+DGFPR  E   A + + K E + +   +     + E+ +R+L R   +GR DDN  TI+
Sbjct:    7 MGPPGAGKGTQAKILCERLSIPQISTGDILREAVKNQTAMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQAEALDTLLKNEGKSIDKAINLQVPDAELLKRLLGRAEIEGRADDNEVTIK 143          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEPIC (Adenylate kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            +G PG+GKGTQ   + E      +S GD+LR  +K+ +  G   +  +  G +VP  V I +++  + E+   + FL+DGFPR  E   A + + K E + +   +     + E+ +R+L R   +GR DDN  TI+
Sbjct:    7 MGPPGAGKGTQAKILCERLSIPQISTGDILREAVKNQTAMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQAEALDTLLKNEGKSIDKAINLQVPDAELLKRLLGRAEIEGRADDNEVTIK 143          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_BOVIN (Adenylate kinase 2, mitochondrial OS=Bos taurus GN=AK2 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.210e-13
Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   + ++F   HL+ GD+LRA + SGSE G  ++  +  GK+V  E+ ++L++K +E     + FL+DGFPR        + +    K + + V+ F   +  + RRI  R
Sbjct:   23 LGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGR 144          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_RALME (Adenylate kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=adk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.259e-13
Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIE--PEFVLFFDCSEEEMERRILNRNQGR 557
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+  G   + ++  G +V  ++ I L++  +++   +K +L DGFPR   +  A  EA   I+   E  + FD   E M  R ++   GR
Sbjct:    6 LGAPGAGKGTQAKFICEKFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLKQPDCEKGYLFDGFPRTIPQAEAMKEAGVAIDYVLEIDVPFDAIIERMSGRRVHVASGR 131          

HSP 2 Score: 25.409 bits (54), Expect = 6.259e-13
Identity = 23/67 (34.33%), Postives = 33/67 (49.25%), Query Frame = 1
Query:  553 EEKMITLRQLGKRFKVFLESSLPVVQYY-------EAKGKV-----RKI----DAAKPVAEVFDAVK 705
            ++K  T+R   KR  V+ + + P+V YY       +A  KV     RKI    +  K  A VFDA+K
Sbjct:  158 DDKEETVR---KRLDVYSQQTRPLVDYYSNWAANGDASAKVSPPKYRKIAGLGEVDKITASVFDALK 221          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_THELT (Adenylate kinase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 35/122 (28.69%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGT   ++   F   H+S GD+ R  + +G+E G  +QN++  G +VP E+  +++++ + +   +K F+ DG+PR      A + + +    + +  ++ + SEE + +R+ +R
Sbjct:    6 LGAPGAGKGTLAKDLSIMFSVPHISTGDMFREAVAAGTELGVKVQNILSSGALVPDEIVNQVVEERLRKQDCEKGFIFDGYPRTIAQAIALDEILQKMSKKLDLAIYLEASEETVVKRLTSR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PSEAE (Adenylate kinase OS=Pseudomonas aeruginosa GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PSEAB (Adenylate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PSEA8 (Adenylate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGR 123          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SHEFN5.210e-1336.13Adenylate kinase OS=Shewanella frigidimarina (stra... [more]
KAD_MYCPA5.210e-1332.84Adenylate kinase OS=Mycobacterium paratuberculosis... [more]
KAD_LEPIN5.210e-1332.12Adenylate kinase OS=Leptospira interrogans GN=adk ... [more]
KAD_LEPIC5.210e-1332.12Adenylate kinase OS=Leptospira interrogans serogro... [more]
KAD2_BOVIN5.210e-1335.25Adenylate kinase 2, mitochondrial OS=Bos taurus GN... [more]
KAD_RALME6.259e-1335.71Adenylate kinase OS=Ralstonia metallidurans (strai... [more]
KAD_THELT6.804e-1328.69Adenylate kinase OS=Thermotoga lettingae (strain A... [more]
KAD_PSEAE6.804e-1336.13Adenylate kinase OS=Pseudomonas aeruginosa GN=adk ... [more]
KAD_PSEAB6.804e-1336.13Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_PSEA86.804e-1336.13Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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