DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PSEA7 (Adenylate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGR 123
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LEPBJ (Adenylate kinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRN--QGREDDNVETIR 584
            +G PG+GKGTQ   +        +S GD+LR  +K+ +  G   +  +  G +VP  V I +++  + E+   + FL+DGFPR  E   A +A+ K E + +   +  +  + E+ +R+L R   +GR DDN  TI+
Sbjct:    7 MGPPGAGKGTQAKILCARLSIPQISTGDILREAVKNQTPMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQADALDALLKNEGKSIDKAINLEVPDGELLKRLLGRAEIEGRADDNEATIK 143
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_LACF3 (Adenylate kinase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAV 470
            +G PG+GKGTQ   IV+ F   H+S GD+ RA IK+ +  G   +  I +G++VP EVT  ++Q+ + ++   D F++DGFPRN     A  A+
Sbjct:    6 MGLPGAGKGTQAQLIVKDFDIPHISTGDIFRAAIKNQTPMGVEAKKFIDKGELVPDEVTNGIVQERLAQDDTKDGFMLDGFPRNLAQADALNAM 99
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_EXIS2 (Adenylate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAV 470
            +G PG+GKGTQ A I+E +   H+S GD+ RA IK  +  G   ++ + +G++VP EVTI ++++ + +E   + FL+DGFPR  +   A E +
Sbjct:    6 MGLPGAGKGTQAAKIIEDYAIPHISTGDMFRAAIKDQTPLGQEAKSYMDKGELVPDEVTIGIVRERLAKEDCANGFLLDGFPRTVKQADALEVL 99
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_COLP3 (Adenylate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   ++  FG   +S GD+LRA IK+GSE G   + ++  G++V  ++ I L+ ++  +E     FL+DGFPR      A +  + I  + VL FD  +E +  R+  R
Sbjct:    6 LGAPGAGKGTQAQFLMAKFGIPQISTGDMLRAAIKAGSELGNKAKAVMDAGQLVSDDLIIGLVKERVAQEDCKAGFLLDGFPRTIPQADAMKE-SGIVVDHVLEFDVPDEVIVERMAGR 123
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_ARCFU (Adenylate kinase OS=Archaeoglobus fulgidus GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.804e-13
Identity = 42/126 (33.33%), Postives = 71/126 (56.35%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGR 557
            LG PG+GKGTQ   + E +G   +S GD+LR  +  G+E G   +  + +G++VP EV I ++++ +++   +K F++DGFPR      A + + K    + + V+     EEE+ +RI  R   R
Sbjct:    6 LGPPGAGKGTQAKRVSEKYGIPQISTGDMLREAVAKGTELGKKAKEYMDKGELVPDEVVIGIVKERLQQPDCEKGFILDGFPRTLAQAEALDEMLKELNKKIDAVINVVVPEEEVVKRITYRRTCR 131
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_ZYMMO (Adenylate kinase OS=Zymomonas mobilis GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 3 
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPEFVLFFDC------SEEEMERRILNR 545
            G PG+GKGTQ   +V  FG   LS GD+LR  +K G+E G +   ++K GK++P ++ I++L + +++      +I DGFPR    +   EA+ K+  E     DC       E  + +RI+ R
Sbjct:    7 GPPGAGKGTQAHRLVHDFGMVQLSTGDILRQAVKEGTEVGKIAGELMKAGKLIPDDLMIRILGERLDKPDTKNGVIFDGFPR---TKPQVEALDKLLAERHSKLDCVIEIKVDENALVKRIVGR 127
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SODGM (Adenylate kinase OS=Sodalis glossinidius (strain morsitans) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+ SE G   + ++  GK+V  E+ I L ++ +++    + FL+DGFPR      A + V  I  ++VL F   +  +  RI+ R
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAQSELGRQAKALMDAGKLVTDELVIALAKERIKQDHCRNGFLLDGFPRTLPQADAMKEV-GIAVDYVLEFAVPDSLIIDRIVGR 123
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHESW (Adenylate kinase OS=Shewanella sp. (strain W3-18-1) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123
[Close]
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEPC (Adenylate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3 
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PSEA76.804e-1336.13Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_LEPBJ6.804e-1332.12Adenylate kinase OS=Leptospira borgpetersenii sero... [more]
KAD_LACF36.804e-1340.43Adenylate kinase OS=Lactobacillus fermentum (strai... [more]
KAD_EXIS26.804e-1339.36Adenylate kinase OS=Exiguobacterium sibiricum (str... [more]
KAD_COLP36.804e-1336.97Adenylate kinase OS=Colwellia psychrerythraea (str... [more]
KAD_ARCFU6.804e-1333.33Adenylate kinase OS=Archaeoglobus fulgidus GN=adk ... [more]
KAD_ZYMMO8.887e-1334.68Adenylate kinase OS=Zymomonas mobilis GN=adk PE=3 ... [more]
KAD_SODGM8.887e-1336.97Adenylate kinase OS=Sodalis glossinidius (strain m... [more]
KAD_SHESW8.887e-1335.29Adenylate kinase OS=Shewanella sp. (strain W3-18-1... [more]
KAD_SHEPC8.887e-1335.29Adenylate kinase OS=Shewanella putrefaciens (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
back to top