DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEON (Adenylate kinase OS=Shewanella oneidensis GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SACD2 (Adenylate kinase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+GS  G  +++++  G +V  ++ I L+++ + E    K FL DGFPR      A  A   +  + VL     +EE+  R+  R
Sbjct:    6 LGAPGAGKGTQAKFIMEAYGVPQISTGDMLRAAVKAGSPLGLKVKDIMTSGGLVSDDIIIDLVKERIAEPDCQKGFLFDGFPRTIPQAEALVA-AGVNIDHVLEIFVEDEEIVSRLSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_NOCSJ (Adenylate kinase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIR 584
            +G PG+GKGTQ   I EHF    +S GD+ RA +  G+  G   +  +  G+ VP EVT ++++  ++E      FL+DG+PR        + + +      + V+     ++E+  R+L R Q  GR DD  + IR
Sbjct:    6 MGPPGAGKGTQAKYIAEHFKIPAISTGDIFRANVTEGTPLGVEAKRYMDAGEYVPDEVTNRMVRNRIDEPDAVGGFLLDGYPRTVAQVEELDGMIRFTGHRLDAVVCLTVDQDEIVGRLLQRAQVEGRADDTEDVIR 142          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_NITHX (Adenylate kinase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 44/155 (28.39%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--------NQGREDDNVETIREAV*GFLRI*SP 620
            LG PG+GKGTQ   +V H G   LS G++LRA + +G+  G   ++++  G +VP +V I ++   +++S   + F++DGFPR      A + + K   ++ + V+    +E  + +R+ +R         Q R DD  E + + +  +  +  P
Sbjct:    6 LGPPGAGKGTQAQRLVHHHGIVQLSTGEMLRAAVAAGTPVGLKAKDVMASGGLVPDDVVIGIISDRLDQSDAKNGFILDGFPRTVPQAEALDRLLKSKNLKLDAVVELCVNESALLQRVESRVAEMTARGEQVRADDTPEVLSKRLASYRALTEP 160          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BACSU (Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 41/122 (33.61%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI--EP-EFVLFFDCSEEEMERRILNR 545
            +G PG+GKGTQ   IVE +G  H+S GD+ RA +K  +  G   ++ I +G++VP EVTI ++++ + +   ++ FL+DGFPR      A E + +   +P ++V+  +  ++ +  R+  R
Sbjct:    6 MGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_ALISL (Adenylate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAE-IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I++ FG   +S GD+LRA  IK+G+E G   +++I  G++V  E+ + L+++ + +    K FL+DGFPR        +    +  ++VL FD ++E +  R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMDKFGIPQISTGDMLRAAIIKAGTEMGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKE-NGVSIDYVLEFDVADEVIVERMSGR 124          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD2_CULQU (Adenylate kinase 2, mitochondrial OS=Culex quinquefasciatus GN=Adk2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.887e-13
Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPR 437
            LG PGSGKGTQ   + E F   HLS GD+LRAEI +GS+ G  ++ ++ EGK+V  ++ + ++   +++    + FL+DGFPR
Sbjct:   25 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIAAGSKIGAQLKKVMDEGKLVSDDLVVDMIDSNLDKPECRNGFLLDGFPR 107          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_AZOSE (Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=adk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.057e-12
Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+  G   + ++  G +V  ++ I L++  ++E      ++ DGFPR      A +    +  +FVL  D  + E+  R+  R
Sbjct:    6 LGPPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKKVMDAGGLVSDDIIIGLVKDRLKEDDCKSGYMFDGFPRTIPQADAMKE-AGVPIDFVLEIDVPDSEIIERMSGR 123          

HSP 2 Score: 24.6386 bits (52), Expect = 1.057e-12
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 1
Query:  580 LGKRFKVFLESSLPVVQYYE---AKG-----KVRKIDAAKPVAEV 690
            + KR +V+   + P+V+YY    A G     KVRKI     V E+
Sbjct:  164 VAKRLEVYHSQTKPLVEYYSKWAASGEPGTPKVRKISGLGAVDEI 208          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_RHOBA (Adenylate kinase OS=Rhodopirellula baltica GN=adk PE=3 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.062e-12
Identity = 40/138 (28.99%), Postives = 68/138 (49.28%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRE 587
            +G PG+GKGTQC  + +     H+  G +LRA      E+G  I   I  G   P +  ++++ ++  +      +L+DGFPR +   +AF+       ++ + VL    S + +  R+  R   + R DD+ E IRE
Sbjct:    6 IGPPGAGKGTQCELLSKALKVPHIGTGGMLRA---LEPESGEQIHLRIDRGHFAPDDFVLQMVAERLSQPDSRTGYLLDGFPRTQVQASAFDKQLVAASLKLDHVLHLQVSADVLIERLRKRGETENRADDSEEFIRE 140          

HSP 2 Score: 29.261 bits (64), Expect = 1.062e-12
Identity = 10/29 (34.48%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  586 KRFKVFLESSLPVVQYYEAKGKVRKIDAA 672
            +RF+++ + + P++ +Y  +G VR IDA+
Sbjct:  140 ERFRIYEDRTAPLLDHYRCQGLVRDIDAS 168          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHESR (Adenylate kinase OS=Shewanella sp. (strain MR-7) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SHEON8.887e-1335.29Adenylate kinase OS=Shewanella oneidensis GN=adk P... [more]
KAD_SACD28.887e-1336.13Adenylate kinase OS=Saccharophagus degradans (stra... [more]
KAD_NOCSJ8.887e-1332.12Adenylate kinase OS=Nocardioides sp. (strain BAA-4... [more]
KAD_NITHX8.887e-1328.39Adenylate kinase OS=Nitrobacter hamburgensis (stra... [more]
KAD_BACSU8.887e-1333.61Adenylate kinase OS=Bacillus subtilis GN=adk PE=1 ... [more]
KAD_ALISL8.887e-1335.83Adenylate kinase OS=Aliivibrio salmonicida (strain... [more]
KAD2_CULQU8.887e-1343.37Adenylate kinase 2, mitochondrial OS=Culex quinque... [more]
KAD_AZOSE1.057e-1233.61Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=... [more]
KAD_RHOBA1.062e-1228.99Adenylate kinase OS=Rhodopirellula baltica GN=adk ... [more]
KAD_SHESR1.161e-1235.29Adenylate kinase OS=Shewanella sp. (strain MR-7) G... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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