DC900064

Overview
NameDC900064
Unique NameDC900064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHESM (Adenylate kinase OS=Shewanella sp. (strain MR-4) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHESA (Adenylate kinase OS=Shewanella sp. (strain ANA-3) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEB9 (Adenylate kinase OS=Shewanella baltica (strain OS195) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEB8 (Adenylate kinase OS=Shewanella baltica (strain OS185) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEB5 (Adenylate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_SHEB2 (Adenylate kinase OS=Shewanella baltica (strain OS223) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_PSEPF (Adenylate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+E G   ++++  G +V  ++ I L++  + ++   K FL DGFPR      A      +E + V+     +EE+ +RI  R
Sbjct:    6 LGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGIKAKSIMDAGGLVSDDLIIALVKDRIAQADCAKGFLFDGFPRTIPQAEAL-VTAGVELDAVVEIAVEDEEIVQRIAGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_EUBE2 (Adenylate kinase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGR 557
            LG PG+GKGTQ   I   +   H+S GD+ RA IK+ +E G   +  + +G++VP E+ + L+    +E+   + +++DGFPR      A +       E V  +  + E  +  I+NR  GR
Sbjct:    6 LGAPGAGKGTQAKKIAAKYAIPHISTGDIFRANIKNNTELGQKAKTYMDKGELVPDELVVDLIMDRFKEADCANGYVLDGFPRTIPQAEALDKALSANGESV-DYAINVEVPDENIINRMSGR 127          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BURVG (Adenylate kinase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G   +  +  GK+VP  + I L+++ ++ES   + +L DGFPR      A +    +  ++VL  D    E+  R+  R
Sbjct:    6 LGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVPDALIIGLVKERLKESDCANGYLFDGFPRTIAQADAMKE-AGVAIDYVLEIDVPFSEIVERMSGR 123          
BLAST of DC900064 vs. ExPASy Swiss-Prot
Match: KAD_BURPS (Adenylate kinase OS=Burkholderia pseudomallei GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.161e-12
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR 545
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+  G   +  + EGK+VP  + I L+++ ++E+   + +L DGFPR      A +    +  ++VL  D    E+  R+  R
Sbjct:    6 LGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKE-AGVAIDYVLEIDVPFSEIIERMSGR 123          
The following BLAST results are available for this feature:
BLAST of DC900064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SHESM1.161e-1235.29Adenylate kinase OS=Shewanella sp. (strain MR-4) G... [more]
KAD_SHESA1.161e-1235.29Adenylate kinase OS=Shewanella sp. (strain ANA-3) ... [more]
KAD_SHEB91.161e-1235.29Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB81.161e-1235.29Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB51.161e-1235.29Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB21.161e-1235.29Adenylate kinase OS=Shewanella baltica (strain OS2... [more]
KAD_PSEPF1.161e-1236.13Adenylate kinase OS=Pseudomonas fluorescens (strai... [more]
KAD_EUBE21.161e-1232.52Adenylate kinase OS=Eubacterium eligens (strain AT... [more]
KAD_BURVG1.161e-1236.97Adenylate kinase OS=Burkholderia vietnamiensis (st... [more]
KAD_BURPS1.161e-1236.13Adenylate kinase OS=Burkholderia pseudomallei GN=a... [more]

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Properties
Property NameValue
Genbank descriptionDC900064 VSS Citrus sinensis cDNA clone VS27Q69 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900064 ID=DC900064; Name=DC900064; organism=Citrus sinensis; type=EST; length=970bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTAGGGAAGCGGTTTAAGGTT
TTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAA
AGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTG
TTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTC
TCTGTCCAGAGTATCAGATTTAATATTAAGGTGGTGGTATTGTTGTTGGC
TGCTGCCTATTANTGTACTTTATTATTATGAGGTTATTATGCCACATGTT
TTACTAGAATGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGT
TTGCCTATGTATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTAA
TAATAACAGCATTGATGCTT
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