CN185846

Overview
NameCN185846
Unique NameCN185846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: JNK1_ANCCA (Stress-activated protein kinase JNK-1 OS=Ancylostoma caninum GN=JNK-1 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.274e-41
Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = 3
Query:   96 YFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNK--SPG----------AVDLLEKMLVFDPNRRITVDEALCHPYLAPLHD 656
            Y LYQ+L G+K++HSA ++HRDLKPSN+++ ++C LKI DFGLART  E   MT YVVTR+YRAPE++L    Y   +D+WSVGCI GE++  + LFPG D++ Q   I EL+G+P+   L  L++   R YV    ++    F   F +    PG          A DLL +MLV DP +RI+VD+AL H Y+   +D
Sbjct:  130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAVEAFMMTPYVVTRYYRAPEVILGMG-YGENVDVWSVGCIFGELIRGRVLFPGADHIDQWTRIIELLGTPEPQFLARLQT-TVRNYVENRQKYQPVPFETLFADNMFPPGADNARLTAAKARDLLSRMLVIDPEKRISVDDALAHEYVNVWYD 326          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: MK04_HUMAN (Mitogen-activated protein kinase 4 OS=Homo sapiens GN=MAPK4 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.663e-41
Identity = 89/215 (41.40%), Postives = 132/215 (61.40%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA-NCDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSAR------FPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFE 704
            K F+YQLLRGLKY+HSANVLHRDLKP+N+ ++  +  LKIGDFGLAR      S   +++E +VT+WYR+P LLL+ + YT AID+W+ GCIL E++T + LF G   + Q++LI E        ++  +R ++    +R++P F    +  +       P  +  A+D LEK+L F+P  R+T +  L HPY++P     +EP    PF  + E
Sbjct:  127 KLFMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILE--------TIPVIREEDKDELLRVMPSFVSSTWEVKRPLRKLLPEVNSEAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPEDEPTSQHPFRIEDE 333          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: NLK_MOUSE (Serine/threonine protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41
Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART--TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRS--DNARRYVRMLPQFPKQNFSARFPNKSPG--------------AVDLLEKMLVFDPNRRITVDEALCHPYL 641
            K FLYQ+LRGLKY+HSA +LHRD+KP NLL+N+NC LKI DFGLAR     E+  MT+ VVT++YRAPE+L+    Y+ AIDIWSVGCI  E++ R+ LF  +  + QL LIT+L+G+P   SL  +R+  + A+ ++             R P+K P               AV LL +MLVFDP++RI+  +AL HPYL
Sbjct:  242 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP---SLEAMRTACEGAKAHI------------LRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 427          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: NLK_HUMAN (Serine/threonine protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41
Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART--TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRS--DNARRYVRMLPQFPKQNFSARFPNKSPG--------------AVDLLEKMLVFDPNRRITVDEALCHPYL 641
            K FLYQ+LRGLKY+HSA +LHRD+KP NLL+N+NC LKI DFGLAR     E+  MT+ VVT++YRAPE+L+    Y+ AIDIWSVGCI  E++ R+ LF  +  + QL LIT+L+G+P   SL  +R+  + A+ ++             R P+K P               AV LL +MLVFDP++RI+  +AL HPYL
Sbjct:  242 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP---SLEAMRTACEGAKAHI------------LRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 427          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41
Identity = 88/215 (40.93%), Postives = 133/215 (61.86%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA-NCDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSAR------FPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFE 704
            K F+YQLLRGLKY+HSANVLHRDLKP+N+ ++  +  LKIGDFGLAR      S   +++E +VT+WYR+P LLL+ + YT AID+W+ GCIL E++T + LF G   + Q++LI +        ++  +R ++    +R++P F    +  +       P+ +  A+D LEK+L F+P  R+T +  L HPY++P     +EP    PF  + E
Sbjct:  127 KLFMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILD--------TIPVVREEDKEELLRVMPSFVSSTWEVKRPLRKLLPDVNSEAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPEDEPTSQHPFRIEDE 333          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: MK06_CHICK (Mitogen-activated protein kinase 6 OS=Gallus gallus GN=MAPK6 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.839e-41
Identity = 90/216 (41.67%), Postives = 132/216 (61.11%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA-NCDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQF-------PKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFE 704
            + F+YQLLRGLKY+HSANVLHRDLKP+NL +N  +  LKIGDFGLAR      S    ++E +VT+WYR+P LLL+ + YT AID+W+ GCI  E++T + LF G   + Q++LI E        S+  +  ++ +  + ++P +       P +  +   P  SP A+D LE++L F P  R+T +EAL HPY++      +EP+   PF  + E
Sbjct:  130 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE--------SIPVVHEEDRQELLNVIPVYIRNDMTEPHKPLTQLLPGISPEALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPTDEPISSHPFHIEDE 337          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 77/135 (57.04%), Postives = 102/135 (75.56%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVR 497
            +YFLYQ++RGLKYVHSA V+HRDLKPSN+L+N NCDLKI DFGLAR       MT YV TR+YRAPE++L   +Y   +DIWS GCI  E++  +PLFPGKD+V+Q  +ITEL+G+P +  +  + S+N  R+V+
Sbjct:   74 QYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVK 206          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.097e-40
Identity = 83/187 (44.39%), Postives = 116/187 (62.03%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPL 650
            K +LYQLL+GL Y H   +LHRDLKP NLL++    LK+ DFGLAR  S      T  +VT WYRAPE+LL    Y+  +D+WSVGCI GE++ ++PLF G   + Q+  I  ++G+PD++   +        YV   P +P Q ++  FP   P A+DL+ KML ++P++RI+  EAL HPY   L
Sbjct:  107 KSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQGALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSI--WPGVTKLPEYVSTFPNWPGQPYNKIFPRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDL 291          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: MK06_RAT (Mitogen-activated protein kinase 6 OS=Rattus norvegicus GN=Mapk6 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.988e-40
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA-NCDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFE 704
            + F+YQLLRGLKY+HSANVLHRDLKP+NL +N  +  LKIGDFGLAR      S    ++E +VT+WYR+P LLL+ + YT AID+W+ GCI  E++T + LF G   + Q++LI E I    E     L S     Y+R     P +  +   P  S  A+D LE++L F P  R+T +EAL HPY++      +EP+   PF  + E
Sbjct:  130 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPTDEPISSHPFHIEDE 337          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: MK06_PONAB (Mitogen-activated protein kinase 6 OS=Pongo abelii GN=MAPK6 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.192e-39
Identity = 93/209 (44.50%), Postives = 127/209 (60.77%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA-NCDLKIGDFGLARTT----SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFE 704
            + F+YQLLRGLKY+HSANVLHRDLKP+NL +N  +  LKIGDFGLAR      S    ++E +VT+WYR+P LLL+ + YT AID+W+ GCI  E++T + LF G   + Q++LI E I    E     L S     Y+R     P +  +   P  S  A+D LE++L F P  R+T +EAL HPY++      +EP+   PF  + E
Sbjct:  130 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDE 337          
The following BLAST results are available for this feature:
BLAST of CN185846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
JNK1_ANCCA1.274e-4145.73Stress-activated protein kinase JNK-1 OS=Ancylosto... [more]
MK04_HUMAN1.663e-4141.40Mitogen-activated protein kinase 4 OS=Homo sapiens... [more]
NLK_MOUSE2.172e-4147.76Serine/threonine protein kinase NLK OS=Mus musculu... [more]
NLK_HUMAN2.172e-4147.76Serine/threonine protein kinase NLK OS=Homo sapien... [more]
MK04_MOUSE2.172e-4140.93Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
MK06_CHICK4.839e-4141.67Mitogen-activated protein kinase 6 OS=Gallus gallu... [more]
HOG1_FUSCU1.078e-4057.04Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
CDC2_DICDI4.097e-4044.39Cell division control protein 2 homolog OS=Dictyos... [more]
MK06_RAT6.988e-4044.50Mitogen-activated protein kinase 6 OS=Rattus norve... [more]
MK06_PONAB1.192e-3944.50Mitogen-activated protein kinase 6 OS=Pongo abelii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185846 ID=CN185846; Name=CN185846; organism=Citrus sinensis; type=EST; length=727bp
ATTTATCAGTGGTGTACAGGGTCTCAGTACTATTTGTGCGTTTATGATAG
TGAAAAACAGCAAACTTTTATGAAATAAGTGCAGGATGACATAAGTACTT
CTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCAAACGTTT
TGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTTAATGCCAATTGTGAT
CTTAAAATTGGAGACTTTGGGCTTGCAAGGACAACATCAGAAACAGATTT
CATGACTGAGTATGTTGTTACTCGTTGGTACCGGGCACCCGAACTGCTTC
TTAACTGTTCAGAGTATACAGCAGCAATTGATATCTGGTCAGTTGGTTGC
ATACTTGGTGAAATTATGACCAGACAACCCCTGTTCCCTGGAAAAGATTA
TGTCCATCAACTGAGGCTGATCACAGAGCTTATAGGTTCACCTGATGAAA
CCAGCCTTGGGTTTCTACGAAGTGATAATGCCAGAAGATATGTTAGAATG
CTTCCACAATTCCCGAAGCAAAATTTCTCTGCTAGATTTCCAAACAAATC
TCCTGGTGCTGTTGATTTGCTGGAGAAGATGCTTGTCTTTGATCCAAACA
GGCGCATTACAGTTGATGAGGCTCTGTGCCACCCATATTTGGCACCCCTT
CATGATATCAATGAGGAGCCTGTTTGCCCAAGACCATTCAGTTTTGATTT
TGAGCATCCATCATTTACTGAAGAAAA
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