CN185846

Overview
NameCN185846
Unique NameCN185846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK9A_XENLA (Cell division protein kinase 9-A OS=Xenopus laevis GN=cdk9-A PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.460e-29
Identity = 76/186 (40.86%), Postives = 106/186 (56.99%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRM-LPQFPKQNFSARFPN--KSPGAVDLLEKMLVFDPNRRITVDEAL 626
            K  +  LL GL Y+H   +LHRD+K +N+L+  +  LK+ DFGLAR       S+ +  T  VVT WYR PELLL   +Y   ID+W  GCI+ E+ TR P+  G    HQL LI++L GS   T   +   D    Y ++ LP+  K+    R     K P A+DL++K+LV DP +R+  D+AL
Sbjct:  131 KKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS--ITPEVWPNVDKYELYQKLELPKGQKRKVKDRLKAYVKDPHALDLIDKLLVLDPTQRLDSDDAL 314          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK7_RAT (Cell division protein kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.460e-29
Identity = 72/185 (38.92%), Postives = 105/185 (56.76%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLA 644
            K ++   L+GL+Y+H   +LHRDLKP+NLLL+ N  LK+ DFGLA++    ++  T  VVTRWYRAPELL     Y   +D+W+VGCIL E++ R P  PG   + QL  I E +G+P E     + S       +  P  P Q+    F       ++L++ + +F+P  RIT  +AL   Y +
Sbjct:  107 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLQHI---FIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFS 288          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.460e-29
Identity = 72/193 (37.31%), Postives = 104/193 (53.89%), Query Frame = 3
Query:   99 FLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSA----------RFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLA 644
            F+  LL+G+++ H  NVLHRDLKP NLL++   +LK+ DFGL R         T  VVT WYR+P++LL  ++Y   +DIWSVGCI  E+    PLF GK+   QL  I   +G+P       +        +   P+F +QN  A           +    P  +DLL ++L ++P  R+T  +AL HPY +
Sbjct:  107 FMRSLLKGVRFCHERNVLHRDLKPPNLLISREKELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQVWPSMNLYPNSTNMLSKPEF-QQNLIATCDEQFQTHPAYAKLGPQGIDLLRRLLRYEPGERLTAAQALEHPYFS 298          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29
Identity = 71/204 (34.80%), Postives = 112/204 (54.90%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKS--PGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDI-----NEEPVCP 680
            K ++YQL R L Y+HS  V HRD+KP NLL++ +   LK+ DFG A+     +    Y+ +R+YRAPEL+   ++YT++ID+WS GC+L E++  QP+FPG   V QL  I +++G+P       +R  N        PQ     ++  F +    P A+ L   +L + P+ R++  EA  H +   L  +     N+ P+ P
Sbjct:  222 KVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFPQIKAHPWTKVFKSSKTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRRLGAQLPNDRPLPP 422          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK4_PIG (Cell division protein kinase 4 OS=Sus scrofa GN=CDK4 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29
Identity = 79/191 (41.36%), Postives = 105/191 (54.97%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSAR--------FPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYL 641
            K  + Q LRGL ++H+  ++HRDLKP N+L+ +   +K+ DFGLAR  S    +T  VVT WYRAPE+LL  S Y   +D+WSVGCI  E+  R+PLF G     QL  I +LIG P E        D+  R V +    P+  FS R         P        LL +ML F+P++RI+   AL H YL
Sbjct:  118 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE--------DDWPRDVSL----PRGAFSPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 295          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK4_BOVIN (Cell division protein kinase 4 OS=Bos taurus GN=CDK4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29
Identity = 80/191 (41.88%), Postives = 106/191 (55.50%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAV--------DLLEKMLVFDPNRRITVDEALCHPYL 641
            K  + Q LRGL ++H+  ++HRDLKP N+L+ +   +K+ DFGLAR  S    +T  VVT WYRAPE+LL  S Y   +D+WSVGCI  E+  R+PLF G     QL  I +LIG P E        D+  R V +    P+  FS R P      V         LL +ML F+P++RI+   AL H YL
Sbjct:  118 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE--------DDWPRDVSL----PRGAFSPRGPRPVQSVVPELEESGAQLLLEMLTFNPHKRISAFRALQHSYL 295          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29
Identity = 78/199 (39.20%), Postives = 109/199 (54.77%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPG-KDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKS-----------PGAVDLLEKMLVFDPNRRITVDEALCHPYLAPL 650
            K FL+QLLRGL Y+H   +LHRDLKP NLL++   +LK+ DFGLAR  S  +   +  VVT WYR P++LL  +EY+  +D+W VGCI  E++     FPG KD   QL  I  ++G+P+E +   + S         LP F  + F+  + +KS             A DL  K+L   P  R++   AL H Y + L
Sbjct:  234 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS---------LPHFKPERFTV-YSSKSLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDL 422          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 67/188 (35.64%), Postives = 107/188 (56.91%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPG-AVDLLEKMLVFDPNRRITVDEALCHPYLAPL 650
            + ++YQLLR + Y+HS    HRD+KP N+LL++    LK+ DFG A+     +    Y+ +R+YRAPEL+   ++YT  ID+WS GC++ E++  Q +FPG   V Q+  I +++G+P       L   N       LP+     +S  F  ++P  A+DL+ KML++ PN R++      HP+   L
Sbjct:  136 RLYMYQLLRSMGYLHSLGFCHRDIKPQNMLLDSETGVLKLCDFGSAKQLISGEPNVSYICSRYYRAPELIFGSTDYTTKIDMWSAGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSEQ---LHDMNPHYKQFKLPELKPHPWSKVFRIRTPAEAIDLVSKMLIYSPNARVSPLMGCAHPFFDEL 320          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDKF2_ORYSJ (Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica GN=CDKF-2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 71/175 (40.57%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  108 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSE-TDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSL-GFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEAL 626
            QLL G+  +H+A V+HRDLKP N+++    DLKI DFG++R T+      T  VVT WYRAPEL+L   EY + +D WS+GCI+ E++   PLFPG+  + QL  + + +G  D  S  GF R   A   +    + P       FP  S    D+L  +L   P+RR+T  +AL
Sbjct:  117 QLLDGVAAMHAAGVMHRDLKPDNVVVGPRGDLKICDFGMSRVTAAGAPPYTSPVVTLWYRAPELILGSQEYDSLVDTWSLGCIMAELLAGAPLFPGRSEMDQLNRVFDTVGMQDMKSWPGFARLPRAESALCSRAR-PPSRLREMFPKLSAAGFDVLSGLLACRPDRRLTAADAL 290          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 73/185 (39.46%), Postives = 103/185 (55.68%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLA 644
            K ++   L+GL+Y+H   +LHRDLKP+NLLL+ N  LK+ DFGLA++  S     T  VVTRWYRAPELL     Y   +D+W+VGCIL E++ R P  PG   + QL  I E +G+P E     + S       +  P  P  +    F       +DL++ + +F+P  RIT  +AL   Y +
Sbjct:  115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHI---FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296          
The following BLAST results are available for this feature:
BLAST of CN185846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK9A_XENLA1.460e-2940.86Cell division protein kinase 9-A OS=Xenopus laevis... [more]
CDK7_RAT1.460e-2938.92Cell division protein kinase 7 (Fragment) OS=Rattu... [more]
CC2H1_TRYCO1.460e-2937.31Cell division control protein 2 homolog 1 OS=Trypa... [more]
GSK3A_MOUSE1.907e-2934.80Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
CDK4_PIG1.907e-2941.36Cell division protein kinase 4 OS=Sus scrofa GN=CD... [more]
CDK4_BOVIN1.907e-2941.88Cell division protein kinase 4 OS=Bos taurus GN=CD... [more]
CDK14_MOUSE1.907e-2939.20Cell division protein kinase 14 OS=Mus musculus GN... [more]
GSK3H_DROME2.491e-2935.64Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
CDKF2_ORYSJ2.491e-2940.57Putative cyclin-dependent kinase F-2 OS=Oryza sati... [more]
CDK7_HUMAN2.491e-2939.46Cell division protein kinase 7 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185846 ID=CN185846; Name=CN185846; organism=Citrus sinensis; type=EST; length=727bp
ATTTATCAGTGGTGTACAGGGTCTCAGTACTATTTGTGCGTTTATGATAG
TGAAAAACAGCAAACTTTTATGAAATAAGTGCAGGATGACATAAGTACTT
CTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCAAACGTTT
TGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTTAATGCCAATTGTGAT
CTTAAAATTGGAGACTTTGGGCTTGCAAGGACAACATCAGAAACAGATTT
CATGACTGAGTATGTTGTTACTCGTTGGTACCGGGCACCCGAACTGCTTC
TTAACTGTTCAGAGTATACAGCAGCAATTGATATCTGGTCAGTTGGTTGC
ATACTTGGTGAAATTATGACCAGACAACCCCTGTTCCCTGGAAAAGATTA
TGTCCATCAACTGAGGCTGATCACAGAGCTTATAGGTTCACCTGATGAAA
CCAGCCTTGGGTTTCTACGAAGTGATAATGCCAGAAGATATGTTAGAATG
CTTCCACAATTCCCGAAGCAAAATTTCTCTGCTAGATTTCCAAACAAATC
TCCTGGTGCTGTTGATTTGCTGGAGAAGATGCTTGTCTTTGATCCAAACA
GGCGCATTACAGTTGATGAGGCTCTGTGCCACCCATATTTGGCACCCCTT
CATGATATCAATGAGGAGCCTGTTTGCCCAAGACCATTCAGTTTTGATTT
TGAGCATCCATCATTTACTGAAGAAAA
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