CN185846

Overview
NameCN185846
Unique NameCN185846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: Y9333_DICDI (Probable inactive serine/threonine-protein kinase DDB_G0280855 OS=Dictyostelium discoideum GN=DDB_G0280855 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24
Identity = 67/203 (33.00%), Postives = 107/203 (52.71%), Query Frame = 3
Query:   96 YFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETD-FMTEYVVTRW-YRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQ-NFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFS 692
            Y LYQLL  +KY++SA V+HR L P  + +N     K+ DF  + +T   TD F  +Y  T W YR+PE ++   E++   D+WS+G I  E++  + LF G+     L  I+ELIG+P         +  AR ++  +P   +      R PN +   +++LE ML ++P +R  ++  + HPY      I E+  C + FS
Sbjct:  164 YVLYQLLTTIKYINSAGVIHRSLDPKTIAVNKEYKTKLFDFSFSISTDYPTDIFFKDYEETPWPYRSPETIIMLKEFSFECDVWSIGVIFAELILGEQLFRGESKQSLLIEISELIGTPTYDECKESTNGFARNFILNIPLKSRHGGIKKRIPNATEEEIEILEGMLCWNPKKRWPIERIIQHPYFQNYCHI-EQYKCDKKFS 365          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CSK22_MOUSE (Casein kinase II subunit alpha' OS=Mus musculus GN=Csnk2a2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24
Identity = 65/207 (31.40%), Postives = 117/207 (56.52%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGE-IMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPK---QNFSARFPN---------KSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEP 671
            ++++Y+LL+ L Y HS  ++HRD+KP N++++     L++ D+GLA            V +R+++ PELL++   Y  ++D+WS+GC+L   I  ++P F G+D   QL  I +++G+  +   G+L+    + ++ + P F     Q+   R+ N          SP A+DLL+K+L +D  +R+T  EA+ HPY  P+     +P
Sbjct:  135 RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT--DELYGYLK----KYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQP 335          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CSK22_BOVIN (Casein kinase II subunit alpha' OS=Bos taurus GN=CSNK2A2 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24
Identity = 65/207 (31.40%), Postives = 117/207 (56.52%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGE-IMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPK---QNFSARFPN---------KSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEP 671
            ++++Y+LL+ L Y HS  ++HRD+KP N++++     L++ D+GLA            V +R+++ PELL++   Y  ++D+WS+GC+L   I  ++P F G+D   QL  I +++G+  +   G+L+    + ++ + P F     Q+   R+ N          SP A+DLL+K+L +D  +R+T  EA+ HPY  P+     +P
Sbjct:  135 RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT--DELYGYLK----KYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQP 335          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: Y823_ENCCU (Probable cell division protein kinase ECU08_0230 OS=Encephalitozoon cuniculi GN=ECU08_0230 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 3
Query:  108 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEAL 626
            QL+ G+ Y+H  NV+HRDLKP N+L+ ++  LKI DFGL+R+        +  VVT WYR+PELL+  + Y   +DIWS+GCI+ E++T +PLFPG+   +QL LI    G+        LR    +R    +P+F                 +++ + L F+ N+RIT DE +
Sbjct:  104 QLICGVHYLHRMNVVHRDLKPQNILVTSDGVLKIADFGLSRSLEIRVPPYSSEVVTLWYRSPELLMGSTSYRFYVDIWSLGCIIYEMITLEPLFPGESKENQLTLIRRKAGTRRS-----LRGMVEQRLA--VPKF---------------VTEIIVRCLDFNYNQRITADEIM 255          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK8_CAEBR (Cell division protein kinase 8 OS=Caenorhabditis briggsae GN=cdk-8 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD------LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD---------YVHQLRLITELIGSPDETSLGFLRS--------DNARRYVRMLPQFP---KQNFSARFPNKSPGAVDLLEKMLVFDPNRRITVDEAL 626
            K  L+Q+L G+ Y+HS  VLHRDLKP+N+LL  +        +KI D G +R  +        +   VVT WYRAPELLL    YT AID+W++GCI  E++T +PLF  K+         +  Q++ I  L+G P +T    ++         ++AR     +  FP   ++ F     N       LL K+L  DP +R++ +EA+
Sbjct:  133 KNILFQILSGMHYLHSNWVLHRDLKPANILLMGDGGPDMRGRVKIADLGFSRIFANPLKPMAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTAEPLFFCKEEDIKAQNPYHYDQVKRIFHLLGYPSDTDWPDMKKMPDHQRLLNDARNEGTPIQTFPNSLQRYFDKWKINSQSSPYRLLVKLLTVDPLKRVSCEEAM 340          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK19_MOUSE (Cell division protein kinase 19 OS=Mus musculus GN=Cdk19 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD---------YVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFP--KQNFS---------ARFPNKSPGAVD-----LLEKMLVFDPNRRITVDEALCHPYLA--PLHDINEEPVCPRPF 689
            K  LYQ+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR  +        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F  +          +  QL  I  ++G P         +D     +R +P++P  +++F           ++  K     D     LL+K+L  DP +RIT ++AL  PY    PL  ++    C  P+
Sbjct:  129 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP---------ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPY 353          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK19_HUMAN (Cell division protein kinase 19 OS=Homo sapiens GN=CDK19 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD---------YVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFP--KQNFS---------ARFPNKSPGAVD-----LLEKMLVFDPNRRITVDEALCHPYLA--PLHDINEEPVCPRPF 689
            K  LYQ+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR  +        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F  +          +  QL  I  ++G P         +D     +R +P++P  +++F           ++  K     D     LL+K+L  DP +RIT ++AL  PY    PL  ++    C  P+
Sbjct:  129 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP---------ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPY 353          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CSK2A_DROME (Casein kinase II subunit alpha OS=Drosophila melanogaster GN=CkIIalpha PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24
Identity = 68/208 (32.69%), Postives = 116/208 (55.77%), Query Frame = 3
Query:   54 KTANFYEISAG*HKYFLYQLLRGLKYVHSANVLHRDLKPSNLLL-NANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGE-IMTRQPLFPGKDYVHQLRLITELIGSPD-ETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNK------SPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPL 650
            +T   YEI     +Y+L++LL+ L Y HS  ++HRD+KP N+++ + N  L++ D+GLA            V +R+++ PELL++   Y  ++D+WS+GC+L   I  ++P F G D   QL  I +++G+ +    L     D   R+  +L +  ++ +  RF +       SP A+D L+K+L +D   R+T  EA+ HPY  P+
Sbjct:  124 QTLTDYEI-----RYYLFELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYAYLDKYNIDLDPRFHDILQRHSRKRWE-RFVHSDNQHLVSPEALDFLDKLLRYDHVDRLTAREAMAHPYFLPI 325          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CSK22_CHICK (Casein kinase II subunit alpha' OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24
Identity = 64/207 (30.92%), Postives = 116/207 (56.04%), Query Frame = 3
Query:   93 KYFLYQLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGE-IMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPK---QNFSARFPN---------KSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEP 671
            ++++Y+LL+ L Y HS  ++HRD+KP N++++     L++ D+GLA            V +R+++ PELL++   Y  ++D+WS+GC+L   I  ++P F G+D   QL  I +++G+  +   G+L+    + ++ + P F     Q+   R+ N          SP  +DLL+K+L +D  +R+T  EA+ HPY  P+     +P
Sbjct:  135 RFYMYELLKALDYCHSMGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGT--DELYGYLK----KYHIELDPHFNDILGQHSRKRWENFIHSENRHLVSPEVLDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQP 335          
BLAST of CN185846 vs. ExPASy Swiss-Prot
Match: CDK8_DANRE (Cell division protein kinase 8 OS=Danio rerio GN=cdk8 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24
Identity = 74/215 (34.42%), Postives = 111/215 (51.63%), Query Frame = 3
Query:   72 EISAG*HKYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLF--------PGKDYVH-QLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFS----ARFPNK-----SPGAVDLLEKMLVFDPNRRITVDEALCHPY 638
            ++  G  K  LYQ+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR ++        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F            Y H QL  I  ++G P +     ++      +  ++  F +  ++     ++  K        A  LL+K+L  DP RRIT ++A+  PY
Sbjct:  122 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLSNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIK--KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIRRITSEQAMQDPY 334          
The following BLAST results are available for this feature:
BLAST of CN185846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y9333_DICDI4.116e-2433.00Probable inactive serine/threonine-protein kinase ... [more]
CSK22_MOUSE5.375e-2431.40Casein kinase II subunit alpha' OS=Mus musculus GN... [more]
CSK22_BOVIN5.375e-2431.40Casein kinase II subunit alpha' OS=Bos taurus GN=C... [more]
Y823_ENCCU7.021e-2437.93Probable cell division protein kinase ECU08_0230 O... [more]
CDK8_CAEBR7.021e-2434.62Cell division protein kinase 8 OS=Caenorhabditis b... [more]
CDK19_MOUSE7.021e-2433.76Cell division protein kinase 19 OS=Mus musculus GN... [more]
CDK19_HUMAN7.021e-2433.76Cell division protein kinase 19 OS=Homo sapiens GN... [more]
CSK2A_DROME9.169e-2432.69Casein kinase II subunit alpha OS=Drosophila melan... [more]
CSK22_CHICK9.169e-2430.92Casein kinase II subunit alpha' OS=Gallus gallus P... [more]
CDK8_DANRE9.169e-2434.42Cell division protein kinase 8 OS=Danio rerio GN=c... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001P08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185846 ID=CN185846; Name=CN185846; organism=Citrus sinensis; type=EST; length=727bp
ATTTATCAGTGGTGTACAGGGTCTCAGTACTATTTGTGCGTTTATGATAG
TGAAAAACAGCAAACTTTTATGAAATAAGTGCAGGATGACATAAGTACTT
CTTGTATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCAAACGTTT
TGCATCGTGATTTGAAGCCTAGCAATTTGCTCCTTAATGCCAATTGTGAT
CTTAAAATTGGAGACTTTGGGCTTGCAAGGACAACATCAGAAACAGATTT
CATGACTGAGTATGTTGTTACTCGTTGGTACCGGGCACCCGAACTGCTTC
TTAACTGTTCAGAGTATACAGCAGCAATTGATATCTGGTCAGTTGGTTGC
ATACTTGGTGAAATTATGACCAGACAACCCCTGTTCCCTGGAAAAGATTA
TGTCCATCAACTGAGGCTGATCACAGAGCTTATAGGTTCACCTGATGAAA
CCAGCCTTGGGTTTCTACGAAGTGATAATGCCAGAAGATATGTTAGAATG
CTTCCACAATTCCCGAAGCAAAATTTCTCTGCTAGATTTCCAAACAAATC
TCCTGGTGCTGTTGATTTGCTGGAGAAGATGCTTGTCTTTGATCCAAACA
GGCGCATTACAGTTGATGAGGCTCTGTGCCACCCATATTTGGCACCCCTT
CATGATATCAATGAGGAGCCTGTTTGCCCAAGACCATTCAGTTTTGATTT
TGAGCATCCATCATTTACTGAAGAAAA
back to top