CN185845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.133e-27 Identity = 54/137 (39.42%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 202 QISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 Q S F L PY + +PH + +T E+H GKHH AYV NLN + E K+LE+++ S ++ + FNNAAQ WNH FFW I DFGS QFGSGWAWLVY Sbjct: 9 QTSYPFVLPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDKEELQKKNLEEIIDWS-SQNQNIAIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGSFEEFCEQFKAEATGQFGSGWAWLVY 144 HSP 2 Score: 40.4318 bits (93), Expect = 4.133e-27 Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ LL DVWEHAYY+D++N+R Sbjct: 156 NAGTPIANGMQPLLACDVWEHAYYIDYRNKR 186
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.136e-27 Identity = 55/131 (41.98%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 FEL PY ++ALEPH+SK+TLEFH GKHH YV LN I GT+ + KSLE++V +S FNNAAQ WNH F+W I +GS FGS W WLV Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKF-ENKSLEEIVCSSDG-----GVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLV 126 HSP 2 Score: 40.4318 bits (93), Expect = 9.136e-27 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 701 NAVNPLVWD-YSSLLTIDVWEHAYYLDFQNRR 793 NA PL D + +LT+D+WEHAYY+D++N R Sbjct: 140 NAATPLTDDGVTPILTVDLWEHAYYIDYRNVR 171
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.545e-26 Identity = 53/137 (38.69%), Postives = 66/137 (48.18%), Query Frame = 1 Query: 202 QISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 Q S F L PY + +PH + +T ++H GKHH AYV NLN + E K LE+++ S ++ FNNAAQ WNH FFW I +DFGS QFGSGWAWLVY Sbjct: 9 QTSYPFILPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDKEELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVY 144 HSP 2 Score: 40.4318 bits (93), Expect = 1.545e-26 Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ LL DVWEHAYY+D++N+R Sbjct: 156 NAGTPIANGMKPLLACDVWEHAYYIDYRNKR 186
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.774e-26 Identity = 51/137 (37.23%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 202 QISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 Q S F L PY + +PH + +T ++H GKHH YV NLN + E K LE+++ S ++ FNNAAQ WNH FFW I +DFGS QFGSGWAWL+Y Sbjct: 9 QTSYPFILPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGSFEEFCEQFKQEAVGQFGSGWAWLIY 144 HSP 2 Score: 41.2022 bits (95), Expect = 5.774e-26 Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ LL DVWEHAYY+D++N+R Sbjct: 156 NAGTPIAHGMKPLLACDVWEHAYYIDYRNKR 186
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RICTY (Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi GN=sodB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.756e-25 Identity = 50/141 (35.46%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 190 KTGGQISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 + Q S F L PY + +PH + +T ++H GKHH +YV NLN + E K LE ++ S +K + FNNA+Q WNH FFW I +DFGS QFGSGW W+VY Sbjct: 5 RKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGSFEQFCEQFKQEALGQFGSGWVWVVY 144 HSP 2 Score: 40.0466 bits (92), Expect = 4.756e-25 Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+V +L DVWEHAYY+D++N+R Sbjct: 156 NADTPIVNLMKPILVCDVWEHAYYIDYRNKR 186
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.190e-25 Identity = 49/137 (35.77%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 202 QISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 Q S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++ S + + NNA+Q WNH FFW I +DFGS QFGSGW W+VY Sbjct: 9 QPSYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAE-VAILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWVVY 144 HSP 2 Score: 40.4318 bits (93), Expect = 6.190e-25 Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+V +L DVWEHAYY+D++N+R Sbjct: 156 NAGTPIVNFMKPILACDVWEHAYYIDYRNKR 186
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.078e-25 Identity = 52/131 (39.69%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F+L PY NALEPH+SK+TLEFH KHH YV+ LN + GTE + K+LE+++ + +NNAAQAWNH F+W L FG FGSGW WLV Sbjct: 3 FQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTE-QEHKTLEELI----KQKPTQAIYNNAAQAWNHAFYWKCMCGCGVKPSEQLIAKLTAA-FGGLEEFKKKFTEKAVGHFGSGWCWLV 127 HSP 2 Score: 42.743 bits (99), Expect = 8.078e-25 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 +AVNP+ LLT DVWEHAYY+D +N R Sbjct: 140 DAVNPMTNGMKPLLTCDVWEHAYYIDTRNNR 170
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 2.315e-24 Identity = 56/134 (41.79%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 FEL PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY G P FNNA Q +NH FW I+ D G QFGSGWAWL K Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY--GTNQPLFNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVK 133 HSP 2 Score: 45.0542 bits (105), Expect = 2.315e-24 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN NPLV + +L +DVWEH+YY+D++N R Sbjct: 143 PNGENPLVHGATPILGVDVWEHSYYIDYRNAR 174
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_BABBO (Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.640e-24 Identity = 51/133 (38.35%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 F+L PY + L PH+S++TL FH+GKHH YV+ LN I GT L + ++E++++ G FNNAAQ WNH F+W IE FGS FGSGW WLV K Sbjct: 3 FKLPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNSLIKGTPL-ESCTIEELIL-----GQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLK 129 HSP 2 Score: 35.039 bits (79), Expect = 8.640e-24 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 737 LLTIDVWEHAYYLDFQNRR 793 LL DVWEHAYY+D++N R Sbjct: 154 LLCCDVWEHAYYIDYKNDR 172
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.907e-23 Identity = 50/129 (38.76%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 220 ELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 606 EL PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S +G + FNNA Q NH+ ++ I++ FGS T FGSGW WL Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS--EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWL 126 HSP 2 Score: 45.0542 bits (105), Expect = 1.907e-23 Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PNA NP+ + LL DVWEHAYYL +QNRR Sbjct: 140 PNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRR 171 The following BLAST results are available for this feature:
BLAST of CN185845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185845 ID=CN185845; Name=CN185845; organism=Citrus sinensis; type=EST; length=793bpback to top |