CN185845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.459e-19 Identity = 46/132 (34.85%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 612 F L+ P+ +++ +S +FH GKHH+ YV+NLN I GT+ KS ++ + G FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDF--EKSSLFAILTKSSGG----VFNNAAQIYNHDFYWDCLSPKATALSDELKEAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAY 126 HSP 2 Score: 38.1206 bits (87), Expect = 1.459e-19 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 NA P+ LL +DVWEHAYY+D +N R Sbjct: 140 NAQTPVTDKKVPLLVVDVWEHAYYIDHKNAR 170
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-19 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFASLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135 HSP 2 Score: 38.5058 bits (88), Expect = 4.180e-19 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 737 LLTIDVWEHAYYLDFQNRR 793 +L +DVWEHAYYL FQNRR Sbjct: 164 ILGLDVWEHAYYLKFQNRR 182
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 5.431e-19 Identity = 50/142 (35.21%), Postives = 62/142 (43.66%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFW----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 + L PY +ALEPH+ T+E H KHH+ YVDN NK + GTE D +E ++ + + KG L NNA NH FW I FGS T+FGSGWAWLV K Sbjct: 3 YTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFAD-LPVEQLIQQLDRVPADKKGALR---NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVK 140 HSP 2 Score: 38.891 bits (89), Expect = 5.431e-19 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 701 NAVNPLVWDY------SSLLTIDVWEHAYYLDFQNRR 793 N NPL+ + + +L +DVWEHAYYL++QNRR Sbjct: 151 NQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRR 187
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.436e-19 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135 HSP 2 Score: 38.5058 bits (88), Expect = 5.436e-19 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 737 LLTIDVWEHAYYLDFQNRR 793 +L +DVWEHAYYL FQNRR Sbjct: 164 ILGLDVWEHAYYLKFQNRR 182
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.436e-19 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135 HSP 2 Score: 38.5058 bits (88), Expect = 5.436e-19 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 737 LLTIDVWEHAYYLDFQNRR 793 +L +DVWEHAYYL FQNRR Sbjct: 164 ILGLDVWEHAYYLKFQNRR 182
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.436e-19 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135 HSP 2 Score: 38.5058 bits (88), Expect = 5.436e-19 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 737 LLTIDVWEHAYYLDFQNRR 793 +L +DVWEHAYYL FQNRR Sbjct: 164 ILGLDVWEHAYYLKFQNRR 182
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.073e-19 Identity = 42/130 (32.31%), Postives = 57/130 (43.85%), Query Frame = 1 Query: 223 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 606 L P PY +ALEPH+ T+E H KHH+ YV+NLN + GT + + +E ++ +A + P NN NH FW I+ G T+FGSGWAWL Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAE-QPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWL 133 HSP 2 Score: 40.4318 bits (93), Expect = 7.073e-19 Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N +PL+ + +L +DVWEHAYYL +QNRR Sbjct: 148 NQDSPLMNGNTPILGLDVWEHAYYLKYQNRR 178
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM2_STAAW (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MW2) GN=sodM PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.077e-19 Identity = 43/133 (32.33%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F+L PY +ALEP++ + T+EFH KHH YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV Sbjct: 3 FKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLV 132 HSP 2 Score: 43.5134 bits (101), Expect = 7.077e-19 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN NPL + +L DVWEHAYYL +QN+R Sbjct: 144 PNQDNPLTEGKTPILLFDVWEHAYYLKYQNKR 175
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM2_STAAS (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MSSA476) GN=sodM PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.077e-19 Identity = 43/133 (32.33%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F+L PY +ALEP++ + T+EFH KHH YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV Sbjct: 3 FKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLV 132 HSP 2 Score: 43.5134 bits (101), Expect = 7.077e-19 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN NPL + +L DVWEHAYYL +QN+R Sbjct: 144 PNQDNPLTEGKTPILLFDVWEHAYYLKYQNKR 175
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM2_STAAR (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MRSA252) GN=sodM PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.077e-19 Identity = 43/133 (32.33%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F+L PY +ALEP++ + T+EFH KHH YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV Sbjct: 3 FKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLV 132 HSP 2 Score: 43.5134 bits (101), Expect = 7.077e-19 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN NPL + +L DVWEHAYYL +QN+R Sbjct: 144 PNQDNPLTEGKTPILLFDVWEHAYYLKYQNKR 175 The following BLAST results are available for this feature:
BLAST of CN185845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185845 ID=CN185845; Name=CN185845; organism=Citrus sinensis; type=EST; length=793bpback to top |