CN185845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.725e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 238 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 606 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.775e-18 Identity = 41/133 (30.83%), Postives = 52/133 (39.10%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F+L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ + + NN NH FW I+ FG +FGSGWAWLV Sbjct: 5 FKLPELGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLV 137 HSP 2 Score: 43.5134 bits (101), Expect = 9.775e-18 Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N NP++ ++ ++ IDVWEHAYYL +QNRR Sbjct: 151 NQDNPVMGGFAPIVGIDVWEHAYYLKYQNRR 181
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.272e-17 Identity = 43/133 (32.33%), Postives = 57/133 (42.86%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 +EL PY +ALEP+ K+T+E H+ KHH YV LN+ + G EL E V ++ A N+ NH FW IE +FG+ +FGSGWAWLV Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLV 135 HSP 2 Score: 40.4318 bits (93), Expect = 1.272e-17 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N +PL + +L +DVWEHAYYL FQNRR Sbjct: 148 NQDSPLSEGKTPVLGLDVWEHAYYLKFQNRR 178
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.625e-17 Identity = 47/141 (33.33%), Postives = 57/141 (40.43%), Query Frame = 1 Query: 223 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKG---DLLP------AFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 615 L P PY +LEPH+ T+ H KHH+ YV+NLN L L+D+ + NK D LP NN +NH FFW IE FGS +FGSGWAWL K Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLN-----AALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNGPNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVK 140 HSP 2 Score: 39.6614 bits (91), Expect = 3.625e-17 Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 2 Query: 698 PNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRR 793 PN NPL+ LL +DVWEHAYYL +QNRR Sbjct: 151 PNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRR 188
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.986e-17 Identity = 48/135 (35.56%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQI-VGTELGDGKSLEDVVIASYN--KGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 + L PY +ALEP++ +T+ H KHH YV NLN I ELG+ KS+E+ +I+ N D+ A NN NH FFW I+ FGS +FGSGWAWLV Sbjct: 3 YTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGE-KSVEN-LISDMNAIPEDIRTAVRNNGGGHANHTFFWEIMAPNAGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLV 135 HSP 2 Score: 38.5058 bits (88), Expect = 7.986e-17 Identity = 16/32 (50.00%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN +PL+ + +L +DVWEHAYYL ++N R Sbjct: 147 PNQDSPLMDGQTPVLGLDVWEHAYYLKYKNVR 178
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.348e-16 Identity = 38/135 (28.15%), Postives = 58/135 (42.96%), Query Frame = 1 Query: 211 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 + F+L Y + LEPH+ +TL H GKHH YV+NLN + KSLE+++ + + K + NN + H FW +I+ F + ++FGSG+ WLV Sbjct: 2 SSFQLPKLSYDYDELEPHIDSNTLSIHHGKHHATYVNNLNATLENYTELHNKSLEELLCNLDTLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLV 136 HSP 2 Score: 43.1282 bits (100), Expect = 1.348e-16 Identity = 20/32 (62.50%), Postives = 21/32 (65.62%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN PL LL IDVWEHAYYL +QNRR Sbjct: 148 PNQDTPLQEGKIPLLVIDVWEHAYYLKYQNRR 179
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.755e-16 Identity = 41/126 (32.54%), Postives = 52/126 (41.27%), Query Frame = 1 Query: 235 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL--PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 606 PY +ALEPH+ T+E H KHH+ YV+ LN I GTE + +E +V A + L N+ NH FW I G T+FGSGWAWL Sbjct: 9 PYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEW-PVEKLVGAVKQLPESLRGAVTNHGGGHANHSLFWTVMSPQGGGEPHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWL 133 HSP 2 Score: 40.817 bits (94), Expect = 1.755e-16 Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N +PL++ + + +DVWEHAYYL +QNRR Sbjct: 148 NQDSPLMFGNTPIFGLDVWEHAYYLKYQNRR 178
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.850e-16 Identity = 37/135 (27.41%), Postives = 58/135 (42.96%), Query Frame = 1 Query: 211 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 + F+L Y + LEP++ +TL H GKHH YV+NLN + KSLE+++ + + K + NN + H FW +I+ F + ++FGSG+ WLV Sbjct: 2 SSFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLV 136 HSP 2 Score: 43.1282 bits (100), Expect = 3.850e-16 Identity = 20/32 (62.50%), Postives = 21/32 (65.62%), Query Frame = 2 Query: 698 PNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 PN PL LL IDVWEHAYYL +QNRR Sbjct: 148 PNQDTPLQEGKIPLLVIDVWEHAYYLKYQNRR 179
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.099e-15 Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ +++ + NN NH FW + I ++FGS +FGSGWAWLV Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLV 138 HSP 2 Score: 35.8094 bits (81), Expect = 1.099e-15 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N NP+ + +L +DVWEHAYYL + N R Sbjct: 152 NQDNPISEGLTPVLGLDVWEHAYYLKYHNVR 182
BLAST of CN185845 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.099e-15 Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 1 Query: 217 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 609 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ +++ + NN NH FW + I ++FGS +FGSGWAWLV Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLV 138 HSP 2 Score: 35.8094 bits (81), Expect = 1.099e-15 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 701 NAVNPLVWDYSSLLTIDVWEHAYYLDFQNRR 793 N NP+ + +L +DVWEHAYYL + N R Sbjct: 152 NQDNPISEGLTPVLGLDVWEHAYYLKYHNVR 182 The following BLAST results are available for this feature:
BLAST of CN185845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185845 ID=CN185845; Name=CN185845; organism=Citrus sinensis; type=EST; length=793bpback to top |