CN185844

Overview
NameCN185844
Unique NameCN185844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASK_ORYLA (GTPase KRas OS=Oryzias latipes GN=kras1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   SE+V  +LVGNKCDL   + V  + A+  A   GIPF+ETSAK+   V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PTRTVDTKQAQDLARSFGIPFIETSAKTRQGVDDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASK_MELGA (GTPase KRas OS=Meleagris gallopavo GN=KRAS PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   SE+V  +LVGNKCDL  ++ V  + A+  A   GIPF+ETSAK+   V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DT GQE +  +   Y R   G + V+ + + +SF ++ Q+  +I R   S++V  +LVGNKCDL A + V    A+  A   GIP++ETSAK+   VE AF  +   I+
Sbjct:   56 YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-AGRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIR 216          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS2_NEUCR (Protein ras-2 OS=Neurospora crassa GN=ras-2 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 61/199 (30.65%), Postives = 104/199 (52.26%), Query Frame = 3
Query:  153 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA--------------------SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPT 689
            L+KL+++GD GVGK+ L ++   + ++E+Y  TI   ++ + V  DG+   L++ DTAGQE +  +   + R   G ++VY ++ + SF  +K++ ++I R                      S  V  +LVGNK D    + VS +   A A E+G  F E SAK+ TNVE+AF  +   ++ +     ++  A PP+
Sbjct:    8 LYKLVVLGDGGVGKTALTIQLCLEHFVETYDPTIEDSYR-KQVVIDGQACMLEVLDTAGQEEYTALRDQWIRDGEGFVLVYSISSRSSFARIKKFHHQIQRVKESTSSPSAYPGSSPLAATNPSAPVPIMLVGNKSDRVTEREVSTQEGHALARELGCEFTEASAKTRTNVEKAFYDVVKQLRKQRQQGQSTPRALPPS 205          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 59/172 (34.30%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  132 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKN 644
            M+ + D  +KL+++G  GVGKS L ++F    +++ Y  TI   ++ + V  D K   L I DTAGQE F  +   Y R   G ++V+ VTD+ SF+ + ++  +I R    E    +LVGNK DL   + VS   A+    ++ + ++E+SAK   NV+ AF  +  +I+N
Sbjct:    1 MSGDLDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCVIDD-KVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVSTAEAQELGRKLKVSYLESSAKQRINVDAAFHDLVRAIRN 171          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RB32B_DICDI (Ras-related protein Rab-32B OS=Dictyostelium discoideum GN=rab32B PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 63/202 (31.19%), Postives = 103/202 (50.99%), Query Frame = 3
Query:  150 YLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA----SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKN--RMASQPASNNARPPTVQIRGQPVNQKSGCC 734
            +L+K+LLIGD  VGKS ++ R+    +  +Y  TIGVDF ++ +E +  K + LQ+WD AG ERF T+T  YYR A   I+V+D++   +F+ V +W  +++        E +  LL+ NK DL+ + V S    +   +   I +  TSA + TN+ +A   +   I    +    P          +  G+  +    CC
Sbjct:   58 HLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQLWDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLANKSDLSTSYVDSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEILEVAKTNHPPKPEEDTLELTKTNGEKSDDSKSCC 259          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASN_XENLA (GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 63/183 (34.43%), Postives = 103/183 (56.28%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-KNRMASQPASNNARPPTVQI 698
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   S++V  +LVGNKCDL  ++ V  + A+  A   GIPF+ETSAK+   VE AF  +   I + RM    +S +     ++I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINAYREQIKRVKDSDDVPMVLVGNKCDL-PSRTVDTKQAQELARSYGIPFIETSAKTRQGVEDAFYTLVREIHQYRMKKLDSSEDNNQGCIRI 184          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASN_PONAB (GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G++ V+ + + +SF ++  +  +I R   S++V  +LVGNKCDL   + V  + A   A   GIPF+ETSAK+   VE AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGLLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 3
Query:  129 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 650
            +++NEY    KL+++G  GVGKS L ++F  + ++E Y  TI   ++ R  + D  T  L I DTAGQ+ +  +   Y R   G + VYDVT + SF  +     +I R   ++ V  +LVGNKCDL   + V+       A    +PF+ETSAK   NV++ F  +   IK  +
Sbjct:    2 SVSNEY----KLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDSYR-RQCQVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSL 171          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS1_RHIRA (Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKL-LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++F    +++ Y  TI   ++ + V  D +T  L + DTAGQE +  +   Y R   G ++VY +T + SF  +  +  +I R    +   + LVGNKCDL  ++ VS +  +  A   G  F+ETSAK   NV++AF  +   I+
Sbjct:   11 YKLVMVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVI-DSETALLDVLDTAGQEEYSAMREQYMRNGEGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDLEGDRQVSSQEGRDLAKNFGCQFIETSAKQRINVDEAFFEVVRDIR 172          
The following BLAST results are available for this feature:
BLAST of CN185844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASK_ORYLA1.418e-2236.20GTPase KRas OS=Oryzias latipes GN=kras1 PE=2 SV=1[more]
RASK_MELGA1.418e-2236.20GTPase KRas OS=Meleagris gallopavo GN=KRAS PE=2 SV... [more]
RASH_MSVHA1.418e-2236.20Transforming protein p29 OS=Harvey murine sarcoma ... [more]
RAS2_NEUCR1.418e-2230.65Protein ras-2 OS=Neurospora crassa GN=ras-2 PE=3 S... [more]
RAS2_HYDMA1.418e-2234.30Ras-like protein RAS2 OS=Hydra magnipapillata GN=R... [more]
RB32B_DICDI1.852e-2231.19Ras-related protein Rab-32B OS=Dictyostelium disco... [more]
RASN_XENLA1.852e-2234.43GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1[more]
RASN_PONAB1.852e-2236.20GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1[more]
RASB_DICDI1.852e-2235.43Ras-like protein rasB OS=Dictyostelium discoideum ... [more]
RAS1_RHIRA1.852e-2234.36Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185844 ID=CN185844; Name=CN185844; organism=Citrus sinensis; type=EST; length=752bp
GAGGCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCATTTGCGATCA
ATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCGAAGTTTCTG
TGATTCATTCGATCCAACGCACGGCACGACCATGAATAACGAATACGATT
ATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGCAAATCGTGT
CTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTACATTAGCAC
CATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATGGCAAAACCA
TTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTTAGGACAATA
ACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGTTTATGATGT
CACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGAATGAAATTG
ACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGTAACAAGTGT
GATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAAGGCATTTGC
GGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAAGTGCCACCA
ACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAGAATAGGATG
GCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGTGCAGATCCG
AGGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTTAGAAGGGAA
TT
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